Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B09
         (383 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   0.53 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   3.7  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   4.9  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   6.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   6.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   6.5  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 268 DIQPTAIHQRAPCYLGSKNDVA 333
           D +P +IHQRA   L +  D+A
Sbjct: 112 DERPNSIHQRASFSLNTDGDIA 133


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 21  EGLMKYIEDKKRPKTGKAY 77
           E L  Y+++++RP  G  +
Sbjct: 506 EALRAYVDNRRRPNPGTVF 524


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization
          protein protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 51 KRPKTGKAYGAR 86
          KRPKT K+ G+R
Sbjct: 39 KRPKTKKSQGSR 50


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 371 NNNKYHLI*CNN 336
           NNN Y  + CNN
Sbjct: 92  NNNNYKKLYCNN 103


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 371 NNNKYHLI*CNN 336
           NNN Y  + CNN
Sbjct: 92  NNNNYKKLYCNN 103


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 371 NNNKYHLI*CNN 336
           NNN Y  + CNN
Sbjct: 92  NNNNYKKLYCNN 103


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 11  NSARGPYEIHRR*KATENWKGL 76
           N+A G YE+    KAT  + GL
Sbjct: 119 NNADGNYEVTLMTKATVYYSGL 140


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 137 TTILDGSVYVGHHRTDIARAVSLSSF 60
           TT+  G  Y   HR D  R V   +F
Sbjct: 153 TTLHHGMAYHRGHRKDYERWVQQGAF 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,932
Number of Sequences: 438
Number of extensions: 2649
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)