Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B08
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000038C776 Cluster: COG4096: Type I site-specific re...    33   4.8  
UniRef50_UPI00006CD050 Cluster: hypothetical protein TTHERM_0019...    32   6.3  
UniRef50_A1CS92 Cluster: Eukaryotic translation initiation facto...    32   8.3  

>UniRef50_UPI000038C776 Cluster: COG4096: Type I site-specific
           restriction-modification system, R (restriction) subunit
           and related helicases; n=1; Nostoc punctiforme PCC
           73102|Rep: COG4096: Type I site-specific
           restriction-modification system, R (restriction) subunit
           and related helicases - Nostoc punctiforme PCC 73102
          Length = 1105

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 254 YARTIPTQADLDKTVSGIPNLSGRTDYGVFCGLQ 153
           Y  +I  Q   +  ++  P  +GR DY +FCGLQ
Sbjct: 252 YQNSIRPQKGRNLAIAEYPTANGRADYALFCGLQ 285


>UniRef50_UPI00006CD050 Cluster: hypothetical protein
           TTHERM_00191070; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00191070 - Tetrahymena
           thermophila SB210
          Length = 134

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 461 KQESDKNSDARFAAVEIKSFAEVEQTVKTAKCECGDKE 348
           K+++ KN   ++   EI SFA++E+  K A  E  DK+
Sbjct: 93  KKKAKKNKKKQYFFTEITSFADIEEKTKVATNETDDKD 130


>UniRef50_A1CS92 Cluster: Eukaryotic translation initiation factor 3
           subunit EifCb, putative; n=15; Pezizomycotina|Rep:
           Eukaryotic translation initiation factor 3 subunit
           EifCb, putative - Aspergillus clavatus
          Length = 741

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = -3

Query: 494 TVGPTSR*FLFKQESDKNSDARFAAVEIKSFAEVEQTVKTAKCECGDKEHAFLAIKEIDD 315
           TVG TS   +F   +DKN    +A VE ++  +    VK       DK+H  L  K +D 
Sbjct: 68  TVGHTSEDAVFMPVNDKNMSEGYAFVEYETPEQAVAAVKQLHGTPLDKKHTLLVNKLMDI 127

Query: 314 NYY 306
             Y
Sbjct: 128 ERY 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,695,246
Number of Sequences: 1657284
Number of extensions: 7962682
Number of successful extensions: 16941
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16934
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)