Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B08
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   4.7  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   4.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.2  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 281 PNGLTLIVLYARTIPTQADLDKTVSGIPNLS 189
           PN   ++ + A     + D D ++SG+P LS
Sbjct: 281 PNNKLILGIPAYGRAWKMDEDSSISGVPPLS 311


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -3

Query: 362 CGDKEHAFLAIKEIDDNYYVVYSAPFTPNGLTLI 261
           C D E  F  + + D    +V      PN  TLI
Sbjct: 381 CTDVEQKFFQVSKFDKRSKLVSILEKAPNERTLI 414


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 350 EHAFLAIKEIDDNYYVVYSAPFTPNG 273
           E  FLA +E    YY +Y      NG
Sbjct: 53  EQLFLAERERGLKYYPIYKLDVCGNG 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,961
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)