Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B05
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 284 GGIVRTYHDYQQI 322
           GG VRT ++YQQ+
Sbjct: 13  GGSVRTLNNYQQV 25


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 366 CCSRDGLHPPCSC 328
           CCS+D  H   SC
Sbjct: 110 CCSQDSCHADKSC 122


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 378 LASGVFTRDVSRALQFAERIDAGTVFVNT 464
           LA+ +  +  S  + F   I  GTV++NT
Sbjct: 67  LATSILLKVSSLLIGFCASIYVGTVWINT 95


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 94   GSPILIFLVSSRTRFTNSSCI 32
            GSP  IFL++    F  ++C+
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACL 1021


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 94   GSPILIFLVSSRTRFTNSSCI 32
            GSP  IFL++    F  ++C+
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACL 1021


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 94   GSPILIFLVSSRTRFTNSSCI 32
            GSP  IFL++    F  ++C+
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACL 1021


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 94   GSPILIFLVSSRTRFTNSSCI 32
            GSP  IFL++    F  ++C+
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACL 1021


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,837
Number of Sequences: 336
Number of extensions: 1807
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)