Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B05
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 237 5e-63
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 3e-38
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 145 1e-35
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 114 4e-26
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 106 1e-23
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 86 1e-17
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 8e-16
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 75 2e-14
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 75 3e-14
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 75 3e-14
SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4) 60 7e-10
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 56 2e-08
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 49 2e-06
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 44 7e-05
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 42 3e-04
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_2595| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 29 1.5
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_29994| Best HMM Match : Ank (HMM E-Value=0) 28 3.5
SB_52134| Best HMM Match : C1_1 (HMM E-Value=1.8) 27 6.1
SB_16545| Best HMM Match : Cullin (HMM E-Value=0) 27 6.1
SB_4303| Best HMM Match : Defensin_beta (HMM E-Value=0.85) 27 6.1
SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013) 27 8.0
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 237 bits (579), Expect = 5e-63
Identities = 105/157 (66%), Positives = 132/157 (84%)
Frame = +3
Query: 9 GRLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGA 188
GRLFVEE+IHDEFV R+++E KK+ IGDPL T HGPQNHKAH+D L+EY + GV+EGA
Sbjct: 68 GRLFVEESIHDEFVNRLVDELKKLKIGDPLDTATDHGPQNHKAHLDSLVEYVKRGVEEGA 127
Query: 189 KLLYGGKRVDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNT 368
KL+YGG+ +DR GFF +P VFT+V DDM+IAKEESFGP++IISKF ++E V+ AN T
Sbjct: 128 KLVYGGRHLDRPGFFFEPAVFTNVEDDMFIAKEESFGPVVIISKFDDGDVEGVLESANGT 187
Query: 369 EYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTD 479
EYGLASGVFT+D+S+AL+ A+ ++AGT FVNTYNKTD
Sbjct: 188 EYGLASGVFTKDMSKALRVADALEAGTCFVNTYNKTD 224
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 154 bits (374), Expect = 3e-38
Identities = 76/149 (51%), Positives = 103/149 (69%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAK 191
R FV++TI+DEFVK+ ++ K ++GDP GPQ + DK+++ E G KEGAK
Sbjct: 616 RTFVQDTIYDEFVKKSVKRAKARTVGDPFD-SVEQGPQIDQEQFDKIMDLIESGKKEGAK 674
Query: 192 LLYGGKRVDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTE 371
+ GG R KGFF QPTVF+DVTDDM IAKEE FGP+ + KF S +++VI RANNT
Sbjct: 675 MQCGGARHGNKGFFIQPTVFSDVTDDMRIAKEEIFGPVQQLIKFKS--VDEVIERANNTT 732
Query: 372 YGLASGVFTRDVSRALQFAERIDAGTVFV 458
YGLA+GVFT+++ A+ + + AGTV+V
Sbjct: 733 YGLAAGVFTKNIDTAIAVSSGLRAGTVWV 761
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 145 bits (352), Expect = 1e-35
Identities = 67/160 (41%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAK 191
R+FVE++I DEF+++V+E TK + +GDP+ T G AH++K+++Y ++G EGAK
Sbjct: 557 RVFVEDSIKDEFLEKVVERTKNIRVGDPMAPDTQMGAMISSAHLNKVLDYVQIGKDEGAK 616
Query: 192 LLYGGKRVD-----RKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRR 356
+L GG+R+ G++ P V + TDDM + KEE FGP+M + F + E+ + R
Sbjct: 617 VLCGGERLHLPEPLTSGYYMSPCVMAECTDDMTVVKEEIFGPVMTVLTFQTE--EEAVTR 674
Query: 357 ANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKT 476
ANNT +GLA G+FTRD++RA + + AGT ++N++N T
Sbjct: 675 ANNTTFGLAGGIFTRDLNRAHRVIGSLQAGTCWINSFNIT 714
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 114 bits (274), Expect = 4e-26
Identities = 59/127 (46%), Positives = 79/127 (62%)
Frame = +3
Query: 90 DPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAKLLYGGKRVDRKGFFSQPTVFTDVTDD 269
D +H T + M K++ E G KEGAKL GG R KG+F QPTVF+DV D+
Sbjct: 65 DKIHGKTIPLGKVDGEQMTKILNLIESGRKEGAKLEVGGDRAGDKGYFIQPTVFSDVQDN 124
Query: 270 MYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGT 449
M IA+EE FGP+M I +F ++M D+I RAN T YGLA V T+++ AL + + GT
Sbjct: 125 MRIAQEEIFGPVMQIFRF--KDMNDIIERANKTTYGLAGSVMTKNLENALMLSNSLRVGT 182
Query: 450 VFVNTYN 470
V+VN Y+
Sbjct: 183 VWVNCYD 189
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 106 bits (254), Expect = 1e-23
Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = +3
Query: 6 AGRLFVEETIHDEFVKRVLEET-KKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKE 182
A R+ V++ I+DEF KR E +++ IG+ + GT GP +K ++K+ + + +
Sbjct: 288 ANRIIVQDGIYDEFAKRFAEAVDQQLKIGNGMDAGTTQGPLINKMAVEKVERHVADALSK 347
Query: 183 GAKLLYGGKRVDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRAN 362
GAKL+ GG R + F +PTV TDV+ DM + KEE+FGP+ + +F + + + AN
Sbjct: 348 GAKLMRGGHRHPQGENFFEPTVLTDVSPDMLVCKEETFGPLAPLVRFKTE--AEAVAIAN 405
Query: 363 NTEYGLASGVFTRDVSRALQFAERIDAGTVFVN 461
+T+ GLA +++D+S+ + AE ++ G V VN
Sbjct: 406 STQSGLAGYFYSQDLSQVWRVAEALEVGLVGVN 438
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 86.2 bits (204), Expect = 1e-17
Identities = 49/155 (31%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Frame = +3
Query: 6 AGRLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEG 185
A R+FV+ I+D+F+++++ + + +G+ L G GP ++A +D + + +
Sbjct: 227 ANRVFVDSKIYDQFIEKLIPVVQDLKVGNGLDSGVNIGPLINQAAIDHAKGLIDDAINQK 286
Query: 186 AKLLYGGKRVDR--KGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRA 359
A+LLY + DR G F P V + +M I EE F P++ + KFS+ E+VI A
Sbjct: 287 AQLLYHLEE-DRSLNGNFLNPVVLGNCNSNMRIFNEEIFAPVIAVYKFSTD--EEVINLA 343
Query: 360 NNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNT 464
N T +GLAS ++++ SR A+ + G V +N+
Sbjct: 344 NKTRFGLASYFYSQNTSRVFNIADELQYGIVGINS 378
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 80.2 bits (189), Expect = 8e-16
Identities = 45/156 (28%), Positives = 79/156 (50%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAK 191
RL V+ET +K++ E + +GDPL + G + + + E EGA+
Sbjct: 914 RLLVQETCAQRMIKKIKERMTHLRLGDPLDKSIDMGAIVDPSQQKSVAKMVEEARAEGAE 973
Query: 192 LLYGGKRVDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTE 371
+ + G + PT+ T+V I EE FGP++++ F R ++ + ANNT
Sbjct: 974 VYQKCASLP-SGCYYPPTLITNVQPVSKIVMEEVFGPVLVVLTF--RTAKEAVAIANNTN 1030
Query: 372 YGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTD 479
+GL + V+T ++S A++ + AG V++N +N D
Sbjct: 1031 FGLGASVWTENLSLAMEVGLSMKAGAVWINGHNLFD 1066
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 75.4 bits (177), Expect = 2e-14
Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAK 191
R+FV + + F +++++ +K+ IG+P T GP K ++ + + +GAK
Sbjct: 300 RIFVHGAVLEIFTEKLVKAIRKIKIGNPQESSTQIGPLISKEQKQTVLALIQGAINDGAK 359
Query: 192 LLYGG--KRVDRK---GFFSQPTVFTDVTDDM--YIAKEESFGPIMIISKFSSRNMEDVI 350
+++GG ++D K GFF +PTV + M I + E GP++ I F R+ + +
Sbjct: 360 VIHGGGSPKLDSKLDRGFFVEPTVLGGFKNSMDNPINQLEVQGPVVRIIPF--RSESEAL 417
Query: 351 RRANNTEYGLASGVFTRDVSRALQFAERIDAGTVF 455
N T YGL++ ++++D RA + A+RI AG F
Sbjct: 418 SGVNVTAYGLSASIWSKDGQRAHRLAQRIRAGCNF 452
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 74.9 bits (176), Expect = 3e-14
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +3
Query: 15 LFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAKL 194
+FV ET E++ ++E+ K++ + G GP + + + GV++GA L
Sbjct: 42 IFVGET--KEWIPEIVEKAKQLKVSAGDQPGADLGPMISPQAKKRACDLVQSGVEQGASL 99
Query: 195 LYGGKRVDRKGF----FSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRAN 362
G+ + KG+ F PTV ++VT +M KEE FGP+++ ++ +ED + N
Sbjct: 100 DLDGRDIVVKGYENGNFVGPTVLSNVTPEMTCYKEEIFGPVLV--ALNADTLEDAVEIIN 157
Query: 363 NTEYGLASGVFTRDVSRALQFAERIDAGTVFVN 461
YG + +FT+ + A +FA++ + G + +N
Sbjct: 158 RNPYGNGTAIFTKSGAIARKFAQKANVGQIGIN 190
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 74.9 bits (176), Expect = 3e-14
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +3
Query: 15 LFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAKL 194
+FV ET E++ ++E+ K++ + G GP + + + GV++GA L
Sbjct: 42 IFVGET--KEWIPEIVEKAKQLKVSAGDQPGADLGPMISPQAKKRACDLVQSGVEQGASL 99
Query: 195 LYGGKRVDRKGF----FSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRAN 362
G+ + KG+ F PTV ++VT +M KEE FGP+++ ++ +ED + N
Sbjct: 100 DLDGRDIVVKGYENGNFVGPTVLSNVTPEMTCYKEEIFGPVLV--ALNADTLEDAVEIIN 157
Query: 363 NTEYGLASGVFTRDVSRALQFAERIDAGTVFVN 461
YG + +FT+ + A +FA++ + G + +N
Sbjct: 158 RNPYGNGTAIFTKSGAIARKFAQKANVGQIGIN 190
>SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4)
Length = 119
Score = 60.5 bits (140), Expect = 7e-10
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAK 191
R+FV+ +I+D F+ ++ET+K+ +G P + G K H++K+ Y + ++G
Sbjct: 16 RIFVQRSIYDNFLDMFVQETRKLIVGPPTENSSFMGALISKDHLEKVKGYIRIAKEDGGT 75
Query: 192 LLYGGKRVD--------RKGFFSQPTVFTDVTDDMYIAKEESF 296
+L G + + G+F +PTV TDV D +EE F
Sbjct: 76 VLCGESKDPPPDLPKEYKNGYFMRPTVITDVKDSSRCMQEEIF 118
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 55.6 bits (128), Expect = 2e-08
Identities = 39/137 (28%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Frame = +3
Query: 15 LFVEETIHDEFVKRVLEETKKMSIGDPLHRGT--AHGPQNHK-AHMDKLIEYCEVGVKEG 185
LFV E I +EF ++ +E+ + + G+P G P+ HK A++ +LI+ + ++G
Sbjct: 54 LFVHEDIVEEFNQKFIEQVENLKYGNPWETGVNITPLPEPHKPAYIQELIKDAQ---EKG 110
Query: 186 AKLL--YGGKRVDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRA 359
AK++ GG+R + F P + V M I +EE FGP++ I F +++++ +
Sbjct: 111 AKVINKNGGERQES---FVYPAILYPVNSTMKIYEEEQFGPVVPILSF--KDIQEPLDYV 165
Query: 360 NNTEYGLASGVFTRDVS 410
+ + YG +F+++ S
Sbjct: 166 SESNYGQQVSLFSKNPS 182
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLHRGTAHGPQ 125
R+FVEE+IHDEFV++ + K +GDPL T GPQ
Sbjct: 1448 RIFVEESIHDEFVRQCVARAKARVVGDPLEEKTVQGPQ 1485
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 44.0 bits (99), Expect = 7e-05
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Frame = +3
Query: 12 RLFVEETIHDEFVKRVLEETKKMSIGDPLH-RGTAHGPQNHKAHMDKLIEYCEVGVKEGA 188
RL+V ++ E + +L E K +G P+ T +A D + Y +
Sbjct: 313 RLYVPKSRWPEIKEALLAELKTAKMGSPVDIDNTFMTAVIDEASFDNIKTYLDFCKSSDE 372
Query: 189 KLLYGGKRVDRK-GFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANN 365
+ G D+ G+F +PT+ + KEE FGP++ + ++++ +N
Sbjct: 373 ITVLAGGNCDKSVGYFVEPTIVETSNPYNKMMKEEIFGPVVCAYVYPDEKYKEMMDVVDN 432
Query: 366 T-EYGLASGVFTRDVS--RALQFAERIDAGTVFVN 461
T E+ L +F D + + A R G +VN
Sbjct: 433 TNEFSLTGAIFGEDPTFIEEARDALRESCGNFYVN 467
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 174 VKEGAKLLYGGKRVDRKGFFSQPTVFTDVTDDMYIAKEESFGPI 305
+ + A+L+ GG R + F +PTV TDV D + EE+FGP+
Sbjct: 210 LSKSARLMRGGHRHPQGENFFEPTVLTDVNQDTLVCMEETFGPL 253
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 38.7 bits (86), Expect = 0.002
Identities = 35/143 (24%), Positives = 61/143 (42%)
Frame = +3
Query: 33 IHDEFVKRVLEETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAKLLYGGKR 212
I +F+K ++ET G+ H +G + H ++L G ++ GG
Sbjct: 224 IQSKFIKS-MKETLYEFYGEDPHDSADYGRIVNDKHYNRLKALLTRGT-----IVLGGDT 277
Query: 213 VDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGV 392
D++ + S PT+ T V + + E FGPI+ I S ++D I N+ + LA +
Sbjct: 278 DDKERYIS-PTILTGVKPSDPVMENEIFGPILPIVSVDS--LDDAIDFINDRDKPLALYI 334
Query: 393 FTRDVSRALQFAERIDAGTVFVN 461
F+ + E +G N
Sbjct: 335 FSNKQESIKRIQENTSSGGFCAN 357
>SB_2595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 213 VDRKGFFSQPTVFTDVTDDMYIAKEESFGPIMIISK 320
VDR G++ +PT+ T + D I ESF PI+ + K
Sbjct: 2 VDRPGYYVEPTIVTGLKHDAEIVHTESFVPILYVLK 37
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 476 RLVVRVDEHCAGVDAFRELQRARHVPREHATSETVLRVVRATDYILHVPAAKFADNHDRS 297
R++ +DE + A + R H PREH + R + T +A +A NHD +
Sbjct: 838 RVIDEIDELKVNIRASSTVSRLYHKPREHVRNSQ--RTMPQTTTTRTQQSADYATNHDNT 895
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = -3
Query: 263 GDVSEHSWLGEEPLAVDAFPPVQ*LSAFFYADLAILDQFVHMCLVVLWPV--SGAAVQRV 90
G+V E W P+AV P ++ F A+ I+ + H LV L+ V + V
Sbjct: 256 GEVWEGLWNNTTPVAVKMLRPGTMSASAFLAEAQIMKKLRHPKLVQLYAVCTKEEPIYIV 315
Query: 89 TDT----HLLSFLKDPLHEL 42
T+ LL +LK PL+ L
Sbjct: 316 TELMGHGSLLDYLKQPLNLL 335
>SB_29994| Best HMM Match : Ank (HMM E-Value=0)
Length = 407
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 150 LIEYCEVGVKEGAKLLYGGKRVDRKGFFSQPTVFTDVTDDMYIAKEE 290
L++ C+V +++ KL+Y K+VD+ S + +T+D+ I EE
Sbjct: 360 LLQMCKVCIRKKLKLIYSTKKVDKLPIPSGMKQY--LTEDVEIEDEE 404
>SB_52134| Best HMM Match : C1_1 (HMM E-Value=1.8)
Length = 154
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 63 EETKKMSIGDPLHRGTAHGPQNHKAHMDKLIEYCEVGVKEGAKLLYGGKRVDR 221
EE+K +PL R + P+ + I+ ++E K +GG +VD+
Sbjct: 4 EESKTRKTAEPLQRAESSKPRVSEPSNKSNIQRDRRSLQEPVKSAFGGAKVDK 56
>SB_16545| Best HMM Match : Cullin (HMM E-Value=0)
Length = 471
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 TAHGPQNHKAHMDKLIEYCEVGVKEGAKLLYGGKRVDRKG 227
T H Q A +DKL +YC++ +K+ K L + ++ G
Sbjct: 207 TFHADQAFHASLDKLAKYCDLILKKSNKNLSDSELDEKLG 246
>SB_4303| Best HMM Match : Defensin_beta (HMM E-Value=0.85)
Length = 203
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 361 TTRSTVSLVAC------SRGTCRARCSSRNASTPAQCSSTRTTR 474
+TR T +V C S C C SRN + C STR TR
Sbjct: 26 STRHTRLIVTCITRINMSHSHCCVTCHSRNIVSHPYCCSTRHTR 69
>SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013)
Length = 1124
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = -3
Query: 413 ARHVPREHATSETVLRVVRATDYILHV--PAAKFADNHDRSERFLLSDVHVVGDVSEHSW 240
A HV R T+ T R + P + H S + D HVV +H W
Sbjct: 716 ALHVARHVNTAGTASADTRCHHEVAAADSPVVCLPERHTDSGESAIPDNHVVDTACQHKW 775
Query: 239 LGEEPLAVDAFPPVQ 195
+ + V + P Q
Sbjct: 776 RNLKEVPVPSLPERQ 790
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,185,966
Number of Sequences: 59808
Number of extensions: 252655
Number of successful extensions: 909
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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