Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B04
         (353 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    37   0.005
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    33   0.076
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    33   0.076
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   0.71 
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   1.6  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    28   1.6  
Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical pr...    28   2.2  
Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical p...    28   2.2  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    27   3.8  
AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U40954-1|ABA00179.1|  251|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 36.7 bits (81), Expect = 0.005
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 188 IEKCAENCISTPEYNPVCGSDNK-TYKNQGRLFCAQNCGVKVTLARQAPCPSS 343
           +E C+ENC     +NPVC  D+K T+ +     CA   G+K   +    C  S
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNWTNCGCS 494


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 32.7 bits (71), Expect = 0.076
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 218 TPEYNPVCGSDNKTYKNQGRL 280
           T E+  VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489



 Score = 29.5 bits (63), Expect = 0.71
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 194 KCAENCISTPEYNPVCGSDNKTYKNQ 271
           KC+E C     +  VCG+D KTY N+
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341



 Score = 27.1 bits (57), Expect = 3.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 191 EKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQNCGVKVTL 316
           + C  N +       VCGSD  TY N   L     C +K+TL
Sbjct: 865 QSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFA-CNIKLTL 905


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 32.7 bits (71), Expect = 0.076
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 218 TPEYNPVCGSDNKTYKNQGRL 280
           T E+  VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497



 Score = 29.5 bits (63), Expect = 0.71
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 194 KCAENCISTPEYNPVCGSDNKTYKNQ 271
           KC+E C     +  VCG+D KTY N+
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 29.5 bits (63), Expect = 0.71
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 206 NCISTPEYNPVCGSDNKTYKNQGRLFCAQ 292
           +C       PVCG+DN TY N   L C Q
Sbjct: 18  DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46



 Score = 29.1 bits (62), Expect = 0.93
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 179 RQTIEKCAENCISTPEYNPVCGSDNKTYKN 268
           R + + C  NC +T E++PVC ++   Y+N
Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRN 137



 Score = 26.2 bits (55), Expect = 6.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 191 EKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQNC 298
           E C   C  T + +P+C SD  TY+N  + F  Q C
Sbjct: 584 EACQMPC--TDDKHPICASDFSTYENLCQ-FRKQKC 616


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
            protein Y26D4A.9 protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 347  LMKTGTGLAWPKSL*LHNFGHKIVFPGFCKFYYRYHTRGCILVLKCNS 204
            L KTG  L   K + ++NF  K +  G C    RY       + KCN+
Sbjct: 950  LKKTGVKLQTIKDIEMYNFIEKGIRGGICNAMLRYSRANNRHLKKCNT 997


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 123 KHRCQVKGKHQLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTREDYF 284
           + R + + +H   AL +H  ++L   +R A     +  CV+++IK   + E  F
Sbjct: 81  EQRHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134


>Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 203 ENCISTPEYNPVCGSD-NKTYKN 268
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 203 ENCISTPEYNPVCGSD-NKTYKN 268
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 182 QTIEKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQN 295
           Q ++ C    + T E NP   S+   YKN  R+ C  N
Sbjct: 284 QCVDACETETV-TDEANPCKFSNAAKYKNGSRIICGPN 320


>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 254 YYRYHTRGCILVLKCNSPRI 195
           YYRYH  G I  +KC  P++
Sbjct: 523 YYRYHYSGRIGEIKCPGPQL 542


>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 328 GLPGQSHFDSTILGTK*SSLVFVSFIIATTHGV 230
           G+P      +   G +  S+  +SFI  TTHG+
Sbjct: 257 GIPNALFIFAAFFGVRHESVAKLSFIFLTTHGL 289


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 328 GLPGQSHFDSTILGTK*SSLVFVSFIIATTHGV 230
           G+P      +   G +  S+  +SFI  TTHG+
Sbjct: 257 GIPNALFIFAAFFGVRHESVAKLSFIFLTTHGL 289


>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
           protein AC3.5 protein.
          Length = 1090

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 210 QFSAHFSIVCRDVPPVLGVDV-CP*PGNGVWFGNCT 106
           QFS +FS  C +VP  L   V C    NGV FGN T
Sbjct: 890 QFSGNFSSDCSEVPGDLREKVYC----NGVEFGNDT 921


>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
           protein F56D5.9 protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 291 WAQNSLPWFL*VLL 250
           W QNS+PW+  VL+
Sbjct: 722 WIQNSIPWYFIVLI 735


>U40954-1|ABA00179.1|  251|Caenorhabditis elegans Hypothetical
           protein ZK813.6 protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 191 EKCAENCISTPEYNPVCGSDNKTYKN 268
           EKC+       E+NPVC    +T+ N
Sbjct: 117 EKCSCTAPCPTEWNPVCDKKGQTHAN 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,578,410
Number of Sequences: 27780
Number of extensions: 202730
Number of successful extensions: 472
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)