Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B01
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L00968-1|AAA29012.1|  493|Drosophila melanogaster UMP synthase; ...    66   2e-11
AY058714-1|AAL13943.1|  493|Drosophila melanogaster LD45235p pro...    66   2e-11
AE014297-2922|AAF55842.1|  493|Drosophila melanogaster CG3593-PA...    66   2e-11
X15707-1|CAA33737.1|  267|Drosophila melanogaster protein ( Dros...    31   0.98 

>L00968-1|AAA29012.1|  493|Drosophila melanogaster UMP synthase; r-l
           gene product protein.
          Length = 493

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 3   GLIQLTPGVQLESSKDSLGQVYNTPEKVILENGADVVVVGRGIVAAKSPE 152
           GL+QLTPGV+++   D LGQ Y +PE V+ E GAD+ VVGRGI+ A SP+
Sbjct: 424 GLLQLTPGVKIDEGVDQLGQQYQSPEHVVKERGADIGVVGRGILKASSPK 473


>AY058714-1|AAL13943.1|  493|Drosophila melanogaster LD45235p
           protein.
          Length = 493

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 3   GLIQLTPGVQLESSKDSLGQVYNTPEKVILENGADVVVVGRGIVAAKSPE 152
           GL+QLTPGV+++   D LGQ Y +PE V+ E GAD+ VVGRGI+ A SP+
Sbjct: 424 GLLQLTPGVKIDEGVDQLGQQYQSPEHVVKERGADIGVVGRGILKASSPK 473


>AE014297-2922|AAF55842.1|  493|Drosophila melanogaster CG3593-PA
           protein.
          Length = 493

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 3   GLIQLTPGVQLESSKDSLGQVYNTPEKVILENGADVVVVGRGIVAAKSPE 152
           GL+QLTPGV+++   D LGQ Y +PE V+ E GAD+ VVGRGI+ A SP+
Sbjct: 424 GLLQLTPGVKIDEGVDQLGQQYQSPEHVVKERGADIGVVGRGILKASSPK 473


>X15707-1|CAA33737.1|  267|Drosophila melanogaster protein (
           Drosophila melanogasterDNA sequence (isolate CBS) for
           18S rRNA  (3'end), 5.8SrRNA and 28S rRNA (5'end).  ).
          Length = 267

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 140 CRNNPTANNYNISTILKNHFLRCIIN 63
           C N P+ N++ IST+L NHF   I N
Sbjct: 121 CDNEPSLNSHTISTMLDNHFGVSIAN 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,069,343
Number of Sequences: 53049
Number of extensions: 299543
Number of successful extensions: 763
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)