Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A24
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxi... 187 5e-48
AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxi... 187 5e-48
AF003384-4|AAO21379.1| 339|Caenorhabditis elegans Hypothetical ... 29 1.4
AF003384-3|AAK71373.1| 349|Caenorhabditis elegans Hypothetical ... 29 1.4
AF016686-6|ABO16457.1| 416|Caenorhabditis elegans Hypothetical ... 29 2.5
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 28 4.3
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical pr... 27 10.0
U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical pr... 27 10.0
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF022968-6|AAB69884.1| 388|Caenorhabditis elegans Dehydrogenase... 27 10.0
>AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform c protein.
Length = 353
Score = 187 bits (455), Expect = 5e-48
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Frame = +3
Query: 3 RLAICALWDAHGWLWHGYEIRGLENLPD-GPYLVIYYHGALPVDMYYFVARMQLFKQTQI 179
R+AI + WD G +WHGYE+RG+EN+PD G L IYYHG LP+D+YY ++++ + K +
Sbjct: 95 RVAIASFWDGVGNVWHGYELRGIENVPDEGSALFIYYHGCLPLDVYYLISKLVIHKNRSL 154
Query: 180 HTVADRFMFRIPGWSMLLENLCVIPGTVQTCASVLKNGNSLAISPGGVYEAQFGD-HYYR 356
H V D+F+F+IPGW L + + GTV+ C LK GN L I+PGGV EA F D + Y
Sbjct: 155 HCVGDKFIFKIPGWRPLCKLFSITSGTVEECTEELKEGNLLCIAPGGVREALFSDPNVYD 214
Query: 357 LNWKTRIGFAKVALEAKVPIVPMFTQNVREAFRTVGWLRGVWLRIY 494
+ W R+GFAKV + +K P++PMFT+N RE+FRT W R + IY
Sbjct: 215 ILWGKRLGFAKVIIGSKTPVIPMFTENCRESFRTPEWGRSFFRWIY 260
>AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform a protein.
Length = 387
Score = 187 bits (455), Expect = 5e-48
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Frame = +3
Query: 3 RLAICALWDAHGWLWHGYEIRGLENLPD-GPYLVIYYHGALPVDMYYFVARMQLFKQTQI 179
R+AI + WD G +WHGYE+RG+EN+PD G L IYYHG LP+D+YY ++++ + K +
Sbjct: 95 RVAIASFWDGVGNVWHGYELRGIENVPDEGSALFIYYHGCLPLDVYYLISKLVIHKNRSL 154
Query: 180 HTVADRFMFRIPGWSMLLENLCVIPGTVQTCASVLKNGNSLAISPGGVYEAQFGD-HYYR 356
H V D+F+F+IPGW L + + GTV+ C LK GN L I+PGGV EA F D + Y
Sbjct: 155 HCVGDKFIFKIPGWRPLCKLFSITSGTVEECTEELKEGNLLCIAPGGVREALFSDPNVYD 214
Query: 357 LNWKTRIGFAKVALEAKVPIVPMFTQNVREAFRTVGWLRGVWLRIY 494
+ W R+GFAKV + +K P++PMFT+N RE+FRT W R + IY
Sbjct: 215 ILWGKRLGFAKVIIGSKTPVIPMFTENCRESFRTPEWGRSFFRWIY 260
>AF003384-4|AAO21379.1| 339|Caenorhabditis elegans Hypothetical
protein K07B1.4b protein.
Length = 339
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 285 KNGNSLAISPGGVYEA-QFGDHYYRLNWKTRIGFAKVALEAKVPIVPMFTQNVREAFRTV 461
K G ++ + GG EA + L K R GF K+AL+ +VP ++ + F
Sbjct: 181 KKGKAVVLVVGGAEEALDAHPGCHILTLKKRKGFVKIALQTGAQLVPCYSFGENDIFNQA 240
Query: 462 GWLRGVWLR 488
+G +R
Sbjct: 241 ENPKGSTIR 249
>AF003384-3|AAK71373.1| 349|Caenorhabditis elegans Hypothetical
protein K07B1.4a protein.
Length = 349
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 285 KNGNSLAISPGGVYEA-QFGDHYYRLNWKTRIGFAKVALEAKVPIVPMFTQNVREAFRTV 461
K G ++ + GG EA + L K R GF K+AL+ +VP ++ + F
Sbjct: 191 KKGKAVVLVVGGAEEALDAHPGCHILTLKKRKGFVKIALQTGAQLVPCYSFGENDIFNQA 250
Query: 462 GWLRGVWLR 488
+G +R
Sbjct: 251 ENPKGSTIR 259
>AF016686-6|ABO16457.1| 416|Caenorhabditis elegans Hypothetical
protein R07C3.15 protein.
Length = 416
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 223 RCSSRIYALSREPCRLAR---RSLRTVTR*RYHPAVFTRRSSAITTIGSTGK 369
R +S++Y+L REP R+A+ +R + +++ V +++A+ +I K
Sbjct: 110 RVASKLYSLKREPERIAQIEDEEVRAAEQEKFNEKVLAHQANALRSIARLSK 161
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 304 RYHPAVFTRRSSAITTIGSTGKQGSASLKWP 396
++ PA+ TRRS+ ++ + T K+ S+S K P
Sbjct: 478 KHIPAMVTRRSARLSALPVTPKKASSSSKMP 508
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 33 HGWLWHGYEIR---GLENLPDGPYLVIYYHGALPVDMYYFVARMQLFKQTQIHTVADRFM 203
HG + +GY + GL + PDG +YYH Y+F + + + ++ T+ + +
Sbjct: 256 HGDMMNGYPKKISQGLTDTPDGINAALYYHE--DGKPYFFKSMQRESYRIELFTILESYF 313
Query: 204 FR 209
++
Sbjct: 314 WQ 315
>Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical
protein C29F7.5 protein.
Length = 722
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = +3
Query: 261 VQTCASVLKNGNSLAISPGGVYEAQFGD-HYYRL---NWKTRI 377
V CA +N + I+P GVY YYR NWK +
Sbjct: 425 VALCALACRNAPDMKITPAGVYAFVLHHWRYYRYANENWKNSV 467
>Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical
protein R05D11.1 protein.
Length = 546
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 204 FRIPGWSMLLENLCVIPGTVQTCASVLKNGNSL 302
F + + +ENLC IP VQ+ + +KNG L
Sbjct: 417 FYLLAGEVYVENLCNIPVFVQSIGANMKNGFQL 449
>U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical
protein C03G6.6 protein.
Length = 307
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 61 FAGWRTCQTVRISLSTITELCLSICIISSHECNYSSRLKSI 183
F W +C TV + E+ ++SS +C+Y + ++ +
Sbjct: 55 FESWNSCFTVEMMGIEDPEIFWKTFVVSSKKCDYQAGVRQL 95
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 458 SSECLAHVLREHWHYRHFSLEGHFSEADPCFPVEPI 351
S++ +A + H R S E ++S + P F +EP+
Sbjct: 612 STDGIARIRLPHQTSRQNSTENYYSSSPPIFTIEPM 647
>AF022968-6|AAB69884.1| 388|Caenorhabditis elegans Dehydrogenases,
short chain protein16 protein.
Length = 388
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = -2
Query: 290 VLKDRRASLHGSRDNA*ILEEHRPSRYTKHESVSYSMDLSLLE*LHSCDEIIHIDRQS 117
+LK++ + L G +NA I H P + + + S++++ L + C + + ++S
Sbjct: 109 ILKEQNSKLWGLVNNAGIFSIHGPDDWCSVDEYASSLNVNTLGAVRMCHAFVPLIKKS 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,922,839
Number of Sequences: 27780
Number of extensions: 241848
Number of successful extensions: 693
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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