Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A23
(479 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.1
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 27 1.1
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 1.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 1.5
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 27 1.5
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 1.9
SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 3.4
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.4
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 5.9
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 25 5.9
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 25 5.9
SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr... 25 7.8
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 7.8
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 7.8
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 25 7.8
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 7.8
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 25 7.8
>SPBC2D10.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 135
Score = 27.5 bits (58), Expect = 1.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 126 MIWMQYRIMFQVFEALAKLALSCRNYF 46
M+W Q R++ + EA A+ AL YF
Sbjct: 47 MVWEQIRVLAKDIEAFAEYALDGNKYF 73
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -2
Query: 463 PDNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAAT 320
P N + +S+ + ++ N+D+AI+N N H D ++ + A+
Sbjct: 467 PSNATKENSLSRNVQSPNIDTAISNRSTNVRHGHPGFKDYTVENSPAS 514
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 27.5 bits (58), Expect = 1.1
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHSVRQATKDDN 233
N+ +AI ++ +TET V S+ S A +L +DD D D++ + KD N
Sbjct: 268 NVPAAIPDAPSVKTETSQNVSQLSVKSAATSLAPVEDDED---DELLLHRHITNKHKDFN 324
Query: 232 LDSAIKSFIGNQTETHGLILESSLNYQNATVTGKKHDLDAVPHNV 98
L +K GL+ + SL+ + + + + D H +
Sbjct: 325 LH--VKQL--------GLLHKPSLDLEEGYIMDENYGKDVYKHGI 359
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 1.5
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -2
Query: 436 VQQAMEDNNLDSAITNSIENQ-TETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHS 260
++ +E+ N+D IT I+N+ T T P L N N D L+ SYP+S
Sbjct: 261 IRLTLENTNIDEDITQMIQNEGTGTTIPPL-PEFNDYFKENGLNYDIDQLISKAPSYPYS 319
Query: 259 VRQATKDDNLDSA 221
+ + +L S+
Sbjct: 320 SSRPSASASLASS 332
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = -2
Query: 280 DVSYPHSVRQATKDDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTGKKHDLDAVPHN 101
D Y HSV + D+ + F + E + + L +++ KH + VP N
Sbjct: 13 DTQYLHSVSSKLPKVDFDTNNEEFFEEEFEIYDPFYRAELPCPKPSLSISKHSIAKVPSN 72
Query: 100 V 98
V
Sbjct: 73 V 73
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 26.6 bits (56), Expect = 1.9
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -2
Query: 451 SDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLT 314
++ S +A +D + S +S+ + +E HD + + L+ + TLT
Sbjct: 100 AETSSGNEAADDEDSSSDAQSSVPSFSEIHDGMSEEELDKERKTLT 145
>SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 3.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 445 PHSVQQAMEDNNLDSAITNSIENQTETHDP 356
PH V+Q+ E+ +++ +EN + +DP
Sbjct: 90 PHGVKQSFENYIQKYPLSDQVENSSNIYDP 119
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 3.4
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 469 AVPDNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKD 302
A+P+N ++ S + M+D+ L S S N + + L L S+ A T KD
Sbjct: 177 AIPENAANLSSSSKNMKDSTLSSQKARS--NTSSSFLTPLHEQLESRCALHTAAKD 230
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 5.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 82 RFENLKHYAVLHPDHVFFQLQSRFDNLNYSLVLD 183
++E+ K V H+F + F +LNY+ ++D
Sbjct: 302 KYESSKAVLVFAVKHLFLMQRPSFVSLNYTTIVD 335
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 25.0 bits (52), Expect = 5.9
Identities = 9/50 (18%), Positives = 29/50 (58%)
Frame = -2
Query: 427 AMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDD 278
AM++ + + ++++N + P+LD +N++ + + ++ + + +DD
Sbjct: 5 AMDERREELSAKSTVQNVKISEAPILDGKVNNEDSHMEIDQPEGSMEEDD 54
>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 25.0 bits (52), Expect = 5.9
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -2
Query: 346 SSLNSQAATLTGNKDDLDLVQDDVSYPHSVRQATKDDNLDSAIKSFIG---NQTETHGLI 176
SSL L N +D V + +R KDD+ +K+ IG N+T T
Sbjct: 352 SSLLENPGRLLRNLQGMDAVSGQIPVTVKLRMGNKDDH--PVVKNLIGRIFNETNTSAAT 409
Query: 175 LESSLNYQ 152
L Q
Sbjct: 410 LHGRSRQQ 417
>SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 169
Score = 24.6 bits (51), Expect = 7.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 385 IENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVS 272
+E E + +L LNS TL K+DL+ ++ V+
Sbjct: 110 LEYTVEEAEALLTQKLNSAEETLKACKEDLEFLRAQVT 147
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 24.6 bits (51), Expect = 7.8
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -2
Query: 418 DNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHS 260
D+N DS S E P + + L S DDL +Q YPHS
Sbjct: 314 DSNTDSFGLESDERSL----PSVSNDLKSSETLKNPRNDDLLTLQQPPRYPHS 362
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 265 HSVRQATKDDNLDSAIKSFIGNQTETHGLILESSLNY 155
H ++ + D A+ SF+GN+T ++G + S Y
Sbjct: 22 HGTKKIYNSNENDRAVNSFLGNRT-SYGEAVNGSPQY 57
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 24.6 bits (51), Expect = 7.8
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -2
Query: 400 AITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHSVRQATKDDNLD 227
A+ + + E + VL Q K +LDL D V P ++ + +DNL+
Sbjct: 127 ALNDELNELGENEEEVLTEQ--KQLDPTLAAKKELDLQMDAVLKPTRTKKRSNEDNLE 182
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 24.6 bits (51), Expect = 7.8
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -2
Query: 445 PHSVQQAMED--NNLDSAITNSIENQTETHDPVLDSSL 338
P +++ A++D ++LDS ITN+ + +E +L+ SL
Sbjct: 178 PITLESALQDETDDLDSYITNTTIDSSEEEPYLLEHSL 215
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 24.6 bits (51), Expect = 7.8
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 304 DDLDLVQDDVSYPHSVRQATKDDNLDSAIKSFIGNQTETHGLILESSLNYQ--NATVTGK 131
D++ +DDV Y +Q K + + I + + T GL+ +S+ ++ A++T K
Sbjct: 349 DEIFACEDDVHYTALPKQNPKSERILEPIIASPKDNTSDKGLLTKSAPTFEELQASITPK 408
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,603,909
Number of Sequences: 5004
Number of extensions: 28420
Number of successful extensions: 103
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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