Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A23
(479 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2181| Best HMM Match : RGS (HMM E-Value=0.11) 34 0.070
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_19617| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_6205| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16) 29 2.0
SB_49934| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_38516| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_58156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_57423| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25613| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_58712| Best HMM Match : Extensin_2 (HMM E-Value=2.7) 28 3.5
SB_52758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_48186| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_55044| Best HMM Match : Ion_trans (HMM E-Value=0.00041) 28 4.6
SB_53742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_9991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_4271| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 27 6.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_46496| Best HMM Match : Tropomyosin (HMM E-Value=0.021) 27 6.1
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 27 6.1
SB_41945| Best HMM Match : Disintegrin (HMM E-Value=2.4) 27 6.1
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_2181| Best HMM Match : RGS (HMM E-Value=0.11)
Length = 1313
Score = 33.9 bits (74), Expect = 0.070
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = -2
Query: 460 DNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQD 281
+N +D S + + + +S +NS ++T+ + + + T T N D +++ Q
Sbjct: 51 ENNNDSLSQNKVTKYEDKESQDSNSNPHRTQVNTESKQETCAGEEGTATENSDSVNIAQP 110
Query: 280 DVSY--PHSVRQATKDDNLDSAIKSFIGNQTETHG 182
PH +A DN S S GN G
Sbjct: 111 SPGAVPPHVPEEAEDSDNYSSRSPSITGNSFSAQG 145
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.9 bits (69), Expect = 0.28
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = -2
Query: 460 DNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQD 281
+N+SD ++ DNN S N I+N ++ D++ S ++ N + D +
Sbjct: 197 NNISDNNNSDNNNSDNNNISDNNNIIDNNNSDNNNTSDNNNTSDNNNISDNNNTSD--NN 254
Query: 280 DVS-YPHSVRQATKDDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTGKKHDLDAVP 107
++S +S T D+N S + N T + +++ N N + KH VP
Sbjct: 255 NISDNNNSDNNNTSDNNNISDNNNSDNNNTSDNNNTSDNN-NSDNNNTSDNKHQQPQVP 312
>SB_19617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = -2
Query: 472 DAVPDNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLD 293
D V D ++D +V M DNN+D + I++ + D ++D +++ +G+ +D
Sbjct: 23 DTVDDMMTDD-TVDDMMIDNNVDDMM---IDDNVD--DMMIDGTVDDMMIDNSGDDMMID 76
Query: 292 LVQDDVSYPHSVRQATKDDNLD 227
DD+ S +DD +D
Sbjct: 77 NTVDDMMIDDSADDMMRDDTVD 98
>SB_6205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = -2
Query: 445 PHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYP 266
P++V+ A+ + NLD A+ ++ + + SSL+ +A + N++ + + P
Sbjct: 241 PNTVKSAITNENLDDAVLVDSQDISLQSNDTSASSLSDMSANASFNEESIAFSSTCIKVP 300
Query: 265 HSVRQATKDDNLDSA 221
+A+K + L SA
Sbjct: 301 ---AEASKSEELPSA 312
>SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16)
Length = 625
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 439 SVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLD 293
++ MED+N ++ T + + T+ H+P L S L S T +KD +D
Sbjct: 73 AITDTMEDSNNSTSETGTPDTTTKEHEPFLVSLLPS--LTDNSHKDSVD 119
>SB_49934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -2
Query: 460 DNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQD 281
DN+S + V N++D + + + + + V D S +A ++ + DDL +D
Sbjct: 145 DNLSSRNKVDGLSSRNDVDDLSSGNDVDDLSSRNDVDDRSSRKEADKVSSHNDDLSSRKD 204
Query: 280 DVS 272
D S
Sbjct: 205 DES 207
>SB_38516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.1 bits (62), Expect = 2.0
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N+ A + N TE V DSS N+ ATL G + +LV D H V
Sbjct: 46 NIHKATLYGVYNTTEL---VYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYGVYNT 102
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
T+ D+ + K+ + T L+ +SS N AT+ G
Sbjct: 103 TELVYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYG 142
Score = 28.7 bits (61), Expect = 2.6
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH--------SV 257
N A + N TE V DSS N+ ATL G + +LV D H +
Sbjct: 200 NTHKATLYGVYNTTEL---VYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYGVYNT 256
Query: 256 RQATKDDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
+ D + + K+ + T L+ +SS N AT+ G
Sbjct: 257 TELVYDSSTRNTHKATLYGVYNTTELVYDSSRNTHKATLYG 297
Score = 27.9 bits (59), Expect = 4.6
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N A + N TE V DSS N+ ATL G + +LV D H V
Sbjct: 112 NTHKATLYGVYNTTEL---VYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYGVYNT 168
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
T+ D+ + K+ + T L+ +SS N AT+ G
Sbjct: 169 TELVYDSSRNTHKATLYGVYNTTKLVYDSSRNTHKATLYG 208
Score = 27.5 bits (58), Expect = 6.1
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N A + N TE V DSS N ATL G + +LV D H V
Sbjct: 355 NTHKATLYGVYNTTEL---VYDSSRNIHKATLYGVYNTTELVYDSTRNTHKATLYGVYNT 411
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
T+ D+ + K+ + T L+ +SS N AT+ G
Sbjct: 412 TELVYDSSRNTHKATLYGVYNTTKLVYDSSRNTHKATLYG 451
Score = 27.1 bits (57), Expect = 8.0
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N A + N TE V DSS N+ ATL G + +LV D H V
Sbjct: 267 NTHKATLYGVYNTTEL---VYDSSRNTHKATLYGVYNTTELVYDSSRNIHKATLYGVYNT 323
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
T+ D+ + K+ + T L+ +SS N AT+ G
Sbjct: 324 TELVYDSSRNTHKATLYGVYNTTKLVYDSSRNTHKATLYG 363
>SB_58156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTET-HDPV-LDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + H P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 26 TKSLRNYFSSFHPPTSLTASLNAHKSTLTGLKGKVLKPPQWDILFPQSGPPTTAED 81
>SB_57423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTET-HDPV-LDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + H P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 26 TKSLRNYFSSFHPPTSLTASLNAHKSTLTGLKGKVLKPPQWDILFPQSGPPTTAED 81
>SB_25613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 421 EDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDD 278
+D N + N +++ +D D + A GN DD+++V+DD
Sbjct: 28 DDGNNNDVANNYVDHGDHGNDQDDDDDPSGNHAVGGGNDDDINIVEDD 75
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 391 NSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHSVRQATKDDNLDSAI 218
+ + N + + +LD SL S A L KDDL+ DD+S R D+L I
Sbjct: 4275 DELVNNMKRLEAILDESL-SYEAQLMAVKDDLEKRSDDLSQSSVERNIEVIDSLQGCI 4331
>SB_58712| Best HMM Match : Extensin_2 (HMM E-Value=2.7)
Length = 349
Score = 28.3 bits (60), Expect = 3.5
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N A + N TE V DSS N+ ATL G + LV D H V
Sbjct: 112 NTHKATLYGVYNTTEL---VYDSSRNTHKATLYGVYNTTKLVYDSSRNTHKATLYGVYNT 168
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
TK D+ + K+ + T L+ +SS N AT+ G
Sbjct: 169 TKLVYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYG 208
Score = 27.9 bits (59), Expect = 4.6
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N A S+ N T+ V DSS N+ ATL G + +LV D H V
Sbjct: 24 NTHKATLYSVYNTTKL---VYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYGVYNT 80
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
T+ D+ + K+ + T L+ +SS N AT+ G
Sbjct: 81 TELVYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYG 120
Score = 27.9 bits (59), Expect = 4.6
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = -2
Query: 412 NLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH-----SVRQA 248
N A + N TE V DSS N+ ATL G + +LV D H V
Sbjct: 46 NTHKATLYGVYNTTEL---VYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYGVYNT 102
Query: 247 TK--DDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
T+ D+ + K+ + T L+ +SS N AT+ G
Sbjct: 103 TELVYDSSRNTHKATLYGVYNTTELVYDSSRNTHKATLYG 142
>SB_52758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTET-HDPV-LDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + H P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 26 TKSLRNYFSSFHPPTSLTASLNAHKSTLTGLKGKVLKPPQWDILFPKSGPPTTAED 81
>SB_48186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTET-HDPV-LDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + H P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 26 TKSLRNYFSSFHPPTSLTASLNAHKSTLTGLKGKVLKPPQWDILFPKSGPPTTAED 81
>SB_55044| Best HMM Match : Ion_trans (HMM E-Value=0.00041)
Length = 855
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 439 SVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQ 329
++++ M++NNL +T++ Q H PV SLN +
Sbjct: 303 AMEEIMQNNNLTMNVTHAAVLQAADHKPVPFESLNEK 339
>SB_53742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTETHDP--VLDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 26 TKSLRNYFSSFHPPTTLTASLNAHKSTLTGLKGKVLKTHQWDLLFPKSGPPTTAED 81
>SB_9991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTETHDP--VLDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 26 TKSLRNYFSSFHPPTTLTASLNAHKSTLTGIKGKVLKPHQWDILFPKSGPPTTAED 81
>SB_4271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 TNSIENQTETHDP--VLDSSLNSQAATLTGNKDD-LDLVQDDVSYPHSVRQATKDD 236
T S+ N + P L +SLN+ +TLTG K L Q D+ +P S T +D
Sbjct: 161 TKSLRNYFSSFHPPTTLTASLNAHKSTLTGLKGKVLKPHQWDILFPKSGPPTTAED 216
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 27.5 bits (58), Expect = 6.1
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = -2
Query: 418 DNNLDSAITNSIE---NQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHSVRQA 248
+NN++S +TN E N TET P D +S + TG+ +L ++++ + ++
Sbjct: 1334 NNNVNSKMTNVDENDVNMTETF-PSADGKSDSLRSCETGDDLNLKRLKNETQVSDNAQEN 1392
Query: 247 TK--DDNL-DSAIKSFIGNQTE 191
K D+N+ + +++ +QTE
Sbjct: 1393 EKMVDENVQEEQVQNLKSDQTE 1414
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.5 bits (58), Expect = 6.1
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Frame = -2
Query: 472 DAVPDNVSDPHSVQQAM--EDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDD 299
+ +P D +V+Q M E + ++S T + Q +T DP++ +QA +D
Sbjct: 1267 EVMPIGTQDGPTVEQNMHQEHSLVNSTHTRTNHGQPQTSDPLIQQPHPAQA-------ND 1319
Query: 298 LDLVQDDVS-YPHSVRQATKD--DNLDSAIK----SFIGNQTETHGLILESS 164
LD + D+ PH Q +D ++ +K FIG + + G + +S
Sbjct: 1320 LDFLPSDLEILPHVDGQEVEDIFAGIEMEMKCRETGFIGIENNSQGCLPNNS 1371
>SB_46496| Best HMM Match : Tropomyosin (HMM E-Value=0.021)
Length = 431
Score = 27.5 bits (58), Expect = 6.1
Identities = 27/106 (25%), Positives = 46/106 (43%)
Frame = -2
Query: 433 QQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPHSVR 254
++++ N IT N TE + + SLN+ +L N+ LD+ + ++
Sbjct: 323 ERSLNINERSLDITERSLNITERSLDITERSLNNNERSLNINERSLDINERSLNINERSL 382
Query: 253 QATKDDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTGKKHDLD 116
T D +LD +S N TE I E SL+ ++ + LD
Sbjct: 383 DIT-DKSLDITERSL--NITERSLDITERSLDINERSLDITERSLD 425
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 310 NKDDLDLVQDDVSYPHSVRQATKDDNLDSAIKSFI 206
N DD+ QDD +P + T D+++ S +S +
Sbjct: 1018 NPDDIKAPQDDKDFPKDTPEPTDDNSISSNDESML 1052
>SB_41945| Best HMM Match : Disintegrin (HMM E-Value=2.4)
Length = 626
Score = 27.5 bits (58), Expect = 6.1
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Frame = -2
Query: 460 DNVSDPHSVQQAMEDNNLDSAITN---SIENQTETHDPVL--DSSLNSQAATLTGNKDDL 296
DN+ D E+NNLD +T S T D ++ + + S++ T + +K
Sbjct: 358 DNIEDDDFADLPSEENNLDEPVTKNQASTSKGTCCSDDLIFVEETATSKSCTSSTSKGTT 417
Query: 295 DLVQDDVSYPHSVRQATKDDNLDSAIKSFIGNQTE 191
+ PH + +T + + ++ N+ E
Sbjct: 418 QQCDVHMGLPHGLDTSTFVPVIPYFLPQYVMNEVE 452
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = -2
Query: 451 SDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDD 299
+D HS Q +E+ + + ++ ++ THD + + + LT D
Sbjct: 921 ADDHSQQSNVEEQAMTATHNRKVDQESSTHDHHMPRDVRETRSPLTSTSAD 971
>SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = -2
Query: 478 DLDAVPDNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDD 299
D+D DN +D + DN+ D+ N +N T T ++ + T T N ++
Sbjct: 84 DIDIHNDNDNDNDNDNDNDNDNDNDNDNDNDNDNDTTTTTTTTTTTTTTTTTTTTNNNNN 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,451,313
Number of Sequences: 59808
Number of extensions: 191228
Number of successful extensions: 612
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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