Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A23
         (479 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039713-10|AAB96721.1|  691|Caenorhabditis elegans Hypothetical...    34   0.061
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    34   0.061
U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical pr...    33   0.14 
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p...    31   0.43 
AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical ...    28   3.1  
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>AF039713-10|AAB96721.1|  691|Caenorhabditis elegans Hypothetical
           protein F57B10.4 protein.
          Length = 691

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = -2

Query: 478 DLDAVPDNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDD 299
           ++D +PDNV     ++    +    S +       ++ HDP    S  S+ + L+G   D
Sbjct: 523 NMDKLPDNVRRESEMEHISHNYGRPSEVNRPASVSSKRHDPAASISATSEESILSGTTQD 582

Query: 298 LDLVQD 281
             ++ D
Sbjct: 583 ESMLND 588


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 33.9 bits (74), Expect = 0.061
 Identities = 22/111 (19%), Positives = 50/111 (45%)
 Frame = -2

Query: 460 DNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQD 281
           +N   P  ++   E+ +L+++         E H  ++ S+ N+Q   LT N +  +  + 
Sbjct: 343 ENSEKPGILEDLAENPDLEASNPEFDAENDEEHAKIVQSTENAQ--NLTENDEKSENHEH 400

Query: 280 DVSYPHSVRQATKDDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTGKK 128
               P +     ++ +L+++   F     E H  +++S+ N QN    G++
Sbjct: 401 LPEKPGNRSDLAENSDLEASKPEFYAENDEKHAELVQSTKNAQNLAENGEE 451


>U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical
           protein F33G12.5 protein.
          Length = 928

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 24/89 (26%), Positives = 47/89 (52%)
 Frame = -2

Query: 457 NVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDD 278
           N +D  S+ + ++  N  + ++ ++    E  + +L++    +  TLT  K D++L +  
Sbjct: 451 NGADLLSLSEQLQ--NEKATVSRAVAQNKELKERLLETE--DRFVTLTKEKADVELAKQ- 505

Query: 277 VSYPHSVRQATKDDNLDSAIKSFIGNQTE 191
            S  H VR+ TK  NL++A    +GN +E
Sbjct: 506 -SAEHQVRELTKQLNLETA--GLVGNLSE 531


>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
            protein F47C12.1 protein.
          Length = 1827

 Score = 31.1 bits (67), Expect = 0.43
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -2

Query: 466  VPDNVSDPHSVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGN 308
            VP++    ++   A E +NLD  +++   +  E H  +L    ++Q   LTGN
Sbjct: 1366 VPNHCLKGYAELAAKEFDNLDKVLSSRCSSSVEVHVKLLKLDFSNQNGVLTGN 1418



 Score = 28.7 bits (61), Expect = 2.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 250  ATKDDNLDSAIKSFIGNQTETHGLILESSLNYQNATVTG 134
            A + DNLD  + S   +  E H  +L+   + QN  +TG
Sbjct: 1379 AKEFDNLDKVLSSRCSSSVEVHVKLLKLDFSNQNGVLTG 1417


>AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical
           protein Y39C12A.8 protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 329 SRYSNWKQR*SGSSAG*CFLSS*RKTSHEGRQFRLSNKKFYWQSN*NSWSNTRE*FKLSK 150
           S  SN K+    SS    F       +H+    +  NKK    SN N+++NTR+ ++  K
Sbjct: 125 SEPSNGKRNEQNSS----FKQDHNSKNHQSNHQKTKNKKSNPYSNQNNFNNTRKDYREEK 180

Query: 149 RDCNW 135
              +W
Sbjct: 181 SGFSW 185


>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
           protein F52H3.7a protein.
          Length = 1245

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
 Frame = -2

Query: 439 SVQQAMEDNNLDSAITNSIENQTETHDPVLDSSLNSQAATLTGNKDDLDLVQDDVSYPH- 263
           S   A ++N  ++A     E++ E HDPV  +S ++ A          + V++ ++  H 
Sbjct: 398 SAPVASDENTTEAAPGTVEEHKNEVHDPVDGASSDAPAEDHREAAASSESVEEPITAVHV 457

Query: 262 -SVRQATKDDNLDSAIKSFIGNQTETH 185
            +   A   D +    K  I +  ETH
Sbjct: 458 EATESAAPADKVHEETK--IDSAAETH 482


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,612,498
Number of Sequences: 27780
Number of extensions: 147562
Number of successful extensions: 444
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)