Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A22
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB067496-1|BAB67802.2| 1287|Homo sapiens KIAA1909 protein protein. 31 1.1
AK090448-1|BAC03429.1| 700|Homo sapiens FLJ00369 protein protein. 29 3.3
AK055252-1|BAB70890.1| 126|Homo sapiens protein ( Homo sapiens ... 29 3.3
AY358172-1|AAQ88539.1| 873|Homo sapiens GPR113 protein. 29 4.4
AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled recep... 29 4.4
AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member ... 29 4.4
AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7 p... 29 4.4
AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transpor... 29 4.4
AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein. 29 4.4
AB065959-1|BAC45265.1| 990|Homo sapiens seven transmembrane hel... 29 4.4
AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein. 29 4.4
BC045637-1|AAH45637.1| 795|Homo sapiens protocadherin beta 12 p... 28 7.7
AF217746-1|AAK51614.1| 795|Homo sapiens protocadherin-beta12 pr... 28 7.7
AF152491-1|AAD43752.1| 795|Homo sapiens protocadherin beta 12 p... 28 7.7
>AB067496-1|BAB67802.2| 1287|Homo sapiens KIAA1909 protein protein.
Length = 1287
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3
Query: 273 LQVSSSLAPHALWSPASSAFTSSFKYCV 190
L VSSS A LWSPA S ++S + CV
Sbjct: 1228 LLVSSSPAHPGLWSPAHSPWSSDIRACV 1255
>AK090448-1|BAC03429.1| 700|Homo sapiens FLJ00369 protein protein.
Length = 700
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -3
Query: 276 CLQVSSSLAPHALWSPASSAFTSSFKYCV*YVFKILKYTLFLYQIGYNFQLTLGPVFV*P 97
C +S +LAPHA + S +S F + + FL + L L P F P
Sbjct: 461 CACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPFLLSFLFPLLLPLLPFFTNP 520
Query: 96 APNDALSPA*SVF 58
+P LS S+F
Sbjct: 521 SPPPFLSTTPSIF 533
>AK055252-1|BAB70890.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ30690 fis, clone FCBBF2000576. ).
Length = 126
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 304 MYDWTEIPLMSPSVFFVSPP 245
++ W E+P + PS FF PP
Sbjct: 21 LFSWREVPFLYPSEFFFLPP 40
>AY358172-1|AAQ88539.1| 873|Homo sapiens GPR113 protein.
Length = 873
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 309 LSCTTGRKYH-SCLQVSSSLAPHALWSPASSAFTSSF 202
+SC T + SC S++LA A WSP + SSF
Sbjct: 146 ISCVTSPGFQLSCCIPSTNLAYTAAWSPGEGSKASSF 182
>AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled receptor
GPR113 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 309 LSCTTGRKYH-SCLQVSSSLAPHALWSPASSAFTSSF 202
+SC T + SC S++LA A WSP + SSF
Sbjct: 345 ISCATSPGFQLSCCIPSTNLAYTAAWSPGEGSKASSF 381
>AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member 7
protein.
Length = 2146
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 313 LTIMYDWTEIPLMSPSVFFVSPP 245
L ++Y W+ PLM P+ FF S P
Sbjct: 1622 LLLLYGWSITPLMYPASFFFSVP 1644
>AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7
protein.
Length = 2146
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 313 LTIMYDWTEIPLMSPSVFFVSPP 245
L ++Y W+ PLM P+ FF S P
Sbjct: 1622 LLLLYGWSITPLMYPASFFFSVP 1644
>AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transporter
protein.
Length = 2146
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 313 LTIMYDWTEIPLMSPSVFFVSPP 245
L ++Y W+ PLM P+ FF S P
Sbjct: 1622 LLLLYGWSITPLMYPASFFFSVP 1644
>AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 309 LSCTTGRKYH-SCLQVSSSLAPHALWSPASSAFTSSF 202
+SC T + SC S++LA A WSP + SSF
Sbjct: 345 ISCATSPGFQLSCCIPSTNLAYTAAWSPGEGSKASSF 381
>AB065959-1|BAC45265.1| 990|Homo sapiens seven transmembrane helix
receptor protein.
Length = 990
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 309 LSCTTGRKYH-SCLQVSSSLAPHALWSPASSAFTSSF 202
+SC T + SC S++LA A WSP + SSF
Sbjct: 227 ISCATSPGFQLSCCIPSTNLAYTAAWSPGEGSKASSF 263
>AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein.
Length = 2008
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 313 LTIMYDWTEIPLMSPSVFFVSPP 245
L ++Y W+ PLM P+ FF S P
Sbjct: 1484 LLLLYGWSITPLMYPASFFFSVP 1506
>BC045637-1|AAH45637.1| 795|Homo sapiens protocadherin beta 12
protein.
Length = 795
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 161 VYFKILNTYHTQYLKLEVKADDAGDH 238
+YF++L TQ+L++E++ D DH
Sbjct: 104 LYFQVLMKNPTQFLQIELQVRDINDH 129
>AF217746-1|AAK51614.1| 795|Homo sapiens protocadherin-beta12
protein.
Length = 795
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 161 VYFKILNTYHTQYLKLEVKADDAGDH 238
+YF++L TQ+L++E++ D DH
Sbjct: 104 LYFQVLMKNPTQFLQIELQVRDINDH 129
>AF152491-1|AAD43752.1| 795|Homo sapiens protocadherin beta 12
protein.
Length = 795
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 161 VYFKILNTYHTQYLKLEVKADDAGDH 238
+YF++L TQ+L++E++ D DH
Sbjct: 104 LYFQVLMKNPTQFLQIELQVRDINDH 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,018,566
Number of Sequences: 237096
Number of extensions: 917627
Number of successful extensions: 1796
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1796
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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