Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A22
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 28 1.4
Z46996-2|CAA87102.1| 679|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z68753-2|CAD56618.1| 480|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z68753-1|CAA92989.1| 499|Caenorhabditis elegans Hypothetical pr... 27 2.4
U64846-9|AAG24117.3| 343|Caenorhabditis elegans Serpentine rece... 27 2.4
Z81593-5|CAB04743.1| 332|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z73422-2|CAA97765.1| 450|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z73105-1|CAA97442.2| 525|Caenorhabditis elegans Hypothetical pr... 26 5.6
AY515708-1|AAR99658.1| 525|Caenorhabditis elegans bestrophin 1 ... 26 5.6
AL132862-34|CAB60536.2| 395|Caenorhabditis elegans Hypothetical... 26 5.6
AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical... 26 5.6
AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical... 26 5.6
AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H... 26 5.6
AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H... 26 5.6
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 26 7.4
U00042-3|AAM97940.1| 175|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 25 9.7
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 25 9.7
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 25 9.7
AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical
protein C29F4.2 protein.
Length = 540
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 301 YDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 209
YDW IPLM P + F++ + + ++S F
Sbjct: 227 YDWVPIPLMYPQLVFMAIHCYYLVCLVSRQF 257
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 282 HSCLQVSSSLAPHALWSPAS 223
HS + SS+ AP ALWSP+S
Sbjct: 448 HSEISSSSTAAPTALWSPSS 467
>Z46996-2|CAA87102.1| 679|Caenorhabditis elegans Hypothetical
protein C34C12.2 protein.
Length = 679
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 260 LR*PPTLYGHRRHQPSLQVS--SIAYDMCSKF 171
LR PP G RRH PS S S+ + CS+F
Sbjct: 604 LRRPPEWKGQRRHAPSYVKSRESVTFRGCSRF 635
>Z68753-2|CAD56618.1| 480|Caenorhabditis elegans Hypothetical
protein ZC518.1b protein.
Length = 480
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 307 IMYDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 209
+ YDW +PL+ P V F++ + + +I F
Sbjct: 226 LKYDWVPVPLVYPQVIFLAVRIYFMICLIGRQF 258
>Z68753-1|CAA92989.1| 499|Caenorhabditis elegans Hypothetical
protein ZC518.1a protein.
Length = 499
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 307 IMYDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 209
+ YDW +PL+ P V F++ + + +I F
Sbjct: 226 LKYDWVPVPLVYPQVIFLAVRIYFMICLIGRQF 258
>U64846-9|AAG24117.3| 343|Caenorhabditis elegans Serpentine
receptor, class h protein193 protein.
Length = 343
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = -2
Query: 295 WTEIPLMSPSVFFVSPPRFMVTGVISLHFKFQVLRMICVQNFKVHLILIPDRI*FPAH 122
+T++PL+ ++ +S +MV ++S+ F+ + IC +FK H + + R+ AH
Sbjct: 92 YTDVPLVYQTIIMMSLFAYMVISIVSI-FENRFFN-ICTFSFKHHWVFL-RRLWLAAH 146
>Z81593-5|CAB04743.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.5 protein.
Length = 332
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 263 LLR*PPTLYGHRRHQPSLQVSSIAYDMCSKF*STPY 156
LL+ PPT+ + ++ V S +D+ F +TPY
Sbjct: 41 LLKTPPTMQSVKWSMMNVHVFSCIFDLSLSFFTTPY 76
>Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical
protein B0564.4 protein.
Length = 523
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -2
Query: 301 YDWTEIPLMSPSVFFVSPPRFMVTGVISLHFKFQVLRMI 185
YDW +PLM P + ++ + + +I+ + +M+
Sbjct: 232 YDWVPLPLMYPQLVCLAVNLYFLVSIIARQLVIEKHKMV 270
>Z73422-2|CAA97765.1| 450|Caenorhabditis elegans Hypothetical
protein B0564.3 protein.
Length = 450
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -2
Query: 301 YDWTEIPLMSPSVFFVSPPRFMVTGVISLHFKFQVLRMI 185
YDW +PLM P + ++ + + +I+ + +M+
Sbjct: 232 YDWVPLPLMYPQLVCLAVNLYFLVSIIARQLVIEKHKMV 270
>Z73105-1|CAA97442.2| 525|Caenorhabditis elegans Hypothetical
protein R13.3 protein.
Length = 525
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 301 YDWTEIPLMSPSVFFVSPPRFMVTGVIS 218
YDW IPL P V F++ + +I+
Sbjct: 230 YDWVPIPLAYPQVVFLAVRSYFFMALIA 257
>AY515708-1|AAR99658.1| 525|Caenorhabditis elegans bestrophin 1
protein.
Length = 525
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 301 YDWTEIPLMSPSVFFVSPPRFMVTGVIS 218
YDW IPL P V F++ + +I+
Sbjct: 230 YDWVPIPLAYPQVVFLAVRSYFFMALIA 257
>AL132862-34|CAB60536.2| 395|Caenorhabditis elegans Hypothetical
protein Y73F8A.11 protein.
Length = 395
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -2
Query: 301 YDWTEIPLMSPSVFFVSPPRFMVTGVISLHF 209
YDW IP+ P V F++ + + ++S +
Sbjct: 228 YDWVPIPIAYPQVVFLAVRVYFIICLVSRQY 258
>AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical
protein Y18D10A.6b protein.
Length = 655
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 298 DWTEIPLMSPSVFFV 254
DW+EI +SP VFF+
Sbjct: 134 DWSEIEALSPDVFFL 148
>AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical
protein Y18D10A.6a protein.
Length = 681
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 298 DWTEIPLMSPSVFFV 254
DW+EI +SP VFF+
Sbjct: 160 DWSEIEALSPDVFFL 174
>AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H
exchanger isoform 8b protein.
Length = 655
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 298 DWTEIPLMSPSVFFV 254
DW+EI +SP VFF+
Sbjct: 134 DWSEIEALSPDVFFL 148
>AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H
exchanger isoform 8a protein.
Length = 681
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 298 DWTEIPLMSPSVFFV 254
DW+EI +SP VFF+
Sbjct: 160 DWSEIEALSPDVFFL 174
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 304 MYDWTEIPLMSPSV 263
MYDW IPLM P +
Sbjct: 269 MYDWVPIPLMYPQL 282
>U00042-3|AAM97940.1| 175|Caenorhabditis elegans Hypothetical
protein T04A6.1a protein.
Length = 175
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 273 LQVSSSLAPHALWSPASSAFTSSFKYCV*YVFKILKYTLFL 151
+ V+ + H L P S F SSFK+ V + T+FL
Sbjct: 92 ISVAENATGHHLRLPFVSTFHSSFKFQVTSTLDVFYITIFL 132
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 11 VLITNKRDELALKLELKTDYAGDRASFGAGQTKTGPRVSWKLYPI 145
+++ ++ A + K+ Y R++ ++KTG + WK PI
Sbjct: 735 IIVLTGKEAAACRNYTKSIYEDLRSTDPKERSKTGKNIDWKRVPI 779
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +2
Query: 113 GPRVSWKLYPIWYKNKVYFKILNTYHTQYLKLEVKADDAGDHKAWGANEEDTWRHEW 283
G V W L I VY+ I+ + Y K GD W +T R EW
Sbjct: 236 GSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGDELPW-----ETCRDEW 287
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 281 THVSKCLLR*PPTLYGHRRHQPSLQVSS 198
+H+ K L PPTL HRR ++ ++
Sbjct: 361 SHIKKIHLEMPPTLLPHRRKPKKMKTTT 388
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 11 VLITNKRDELALKLELKTDYAGDRASFGAGQTKTGPRVSWKLYPI 145
+++ ++ A + K+ Y R++ ++KTG + WK PI
Sbjct: 735 IIVLTGKEAAACRNYTKSIYEDLRSTDPKERSKTGKNIDWKRVPI 779
>AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical
protein K10B4.4 protein.
Length = 403
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 325 VEQYLTIMYDWTEIPLMSPSVFFVSPPRFMVTG 227
+++ L++ W+E +SP V F+S F ++G
Sbjct: 289 IQRLLSVYTTWSETTTISPPVQFLSMIVFYISG 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,582,940
Number of Sequences: 27780
Number of extensions: 147098
Number of successful extensions: 359
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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