Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A22
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   1.2  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   3.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   8.8  

>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -2

Query: 283 PLMSPSVFFVSPPRFMVTGVISLHFKFQVLRMICVQNFKVHLILIPDR 140
           P+      F  PP  +  G     F+F+ ++ +    FK  +  +PDR
Sbjct: 26  PVQELKALFAEPPVRVSNGGKEQDFRFEAIQCLQSSAFK-EIKTLPDR 72


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 YKNKVYFKILNTYHTQYLKLE 211
           YK   Y    N Y+T Y KL+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKLQ 109


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 277 MSPSVFFVSPPRFMVTGVISLHFKFQVLRMICVQNFKVHL 158
           +S  +FFV P   ++   I +  K +  RM+     + HL
Sbjct: 224 ISTMLFFVLPMTIIIVLYILIAIKLRRSRMLTATVNRNHL 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,671
Number of Sequences: 438
Number of extensions: 2055
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)