Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A18
         (422 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)               30   0.69 
SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7)                   29   1.2  
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.6  
SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.8  
SB_29994| Best HMM Match : Ank (HMM E-Value=0)                         28   2.8  
SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)              28   2.8  
SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)          28   2.8  
SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.8  
SB_43502| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.8  
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)           27   4.8  
SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)             27   4.8  
SB_29938| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  
SB_2046| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-20)                  27   8.5  

>SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)
          Length = 401

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 6   PVLAWTKAKELYSSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVNYTHTD 167
           PVL W + + + +SLS  E      P           R+   K VHLV + HTD
Sbjct: 174 PVLYWNEGRAVQTSLSLDEGLRAVIPLHSINEIN---RKNQDKLVHLVGHLHTD 224


>SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7)
          Length = 364

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +3

Query: 126 ARKFVHLVNYTH-----TDLPRNVRQGLTL-VTKHMSFAADSLLKTVPVETAMVEIKGWK 287
           A +F+  +NYT       D+P++   G+T      + FAA+    TVPV+  +  I  WK
Sbjct: 122 AGEFLVTINYTSGSWYSVDIPKSAFTGMTWDAVFQLKFAANGAGSTVPVDIYLDNIYFWK 181


>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1090

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 204 TKHMS-FAADSLLKTVPVETAMVEIKGWKE 290
           TK +S F  DS LK V  E+  VE+ GW+E
Sbjct: 819 TKWLSNFVIDSYLKIVKSESTNVEVFGWEE 848


>SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 712

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 217 LLQPTLFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPH 327
           LL+P     RY +K  +    A  +  KFYY+   PH
Sbjct: 139 LLEPVFLKSRYCFKSSYDLVSASLRQWKFYYNVSLPH 175


>SB_29994| Best HMM Match : Ank (HMM E-Value=0)
          Length = 407

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 176 KRTPRLDACYQAHVFCSRLSSQDGTRGN 259
           KRTP  +AC Q +V C+ L    G + N
Sbjct: 260 KRTPLHEACQQGNVLCTTLLLDAGAKPN 287


>SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)
          Length = 528

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 216 SFAADSLLKTVPVETAMVEIKGWKE 290
           +F  DS LK V  E+  VE+ GW+E
Sbjct: 409 NFVIDSYLKIVKSESTNVEVFGWEE 433


>SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)
          Length = 313

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 216 SFAADSLLKTVPVETAMVEIKGWKE 290
           +F  DS LK V  E+  VE+ GW+E
Sbjct: 126 NFVIDSYLKIVKSESTNVEVFGWEE 150


>SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1922

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 216  SFAADSLLKTVPVETAMVEIKGWKE 290
            +F  DS LK V  E+  VE+ GW+E
Sbjct: 1674 NFVIDSYLKIVKSESTNVEVFGWEE 1698


>SB_43502| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 189

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 232 ESAAKDMCLVTSVKPWRTFLGKSVWV*LTRCTN 134
           +   ++ C  T  KPW + L K  W   TRC +
Sbjct: 106 QDVKEETCENTPTKPWLSLLLKFSWEIFTRCVH 138


>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
          Length = 1207

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +2

Query: 80  PRHARGVGRVADQ----GNREEIRASRQLHPHGLA*KRTPRLDACYQAHVFCSRLSSQDG 247
           P H +G   + DQ    G  +E+  S   H   +    TP+  A Y+ H+   +LS+Q  
Sbjct: 450 PIHQKGTAVLVDQELLNGVEKEVAPSTP-HIVAVPPATTPKKPAIYKFHIRVDKLSTQSD 508

Query: 248 TRGNCYGRDQRLEGK-TPNSIT 310
                + RD   EGK TP   +
Sbjct: 509 QLREEF-RDSYREGKSTPRKFS 529


>SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)
          Length = 495

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 216 SFAADSLLKTVPVETAMVEIKGWKE 290
           +F  DS LK V  E+  VE+ GW+E
Sbjct: 284 NFVIDSHLKIVKSESTNVEVFGWEE 308


>SB_29938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1008

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 208 STCLLQPTLFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPHPRPILNTSP 354
           STC+  P+    R P K  WS  +  +  S     +  P P P +NT P
Sbjct: 758 STCISDPSKL--REPPKSAWSTPRQEKSPSGLQICNPFPSPVPPINTIP 804


>SB_2046| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-20)
          Length = 339

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 301 IWSFSFQPLISTIAVSTGTVLRRESAAKDMCLVTSVKPW 185
           +W  S    +S + +ST   +R  +A   +CLVTS+  +
Sbjct: 157 LWVLSILLGLSQLVLSTKAFIRLIAAVMTICLVTSISAY 195


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,666
Number of Sequences: 59808
Number of extensions: 329455
Number of successful extensions: 936
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)