Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A14
         (611 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)              79   3e-15
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)            71   6e-13
SB_26408| Best HMM Match : Lipase (HMM E-Value=0)                      63   2e-10
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)               46   2e-05
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)                  42   4e-04
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)                  39   0.004
SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)           29   2.2  
SB_52448| Best HMM Match : X (HMM E-Value=1.7)                         29   3.0  
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_870| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09)                   27   9.1  

>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 940

 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   NILALDGSSLIRWLYLHSTTYVRFIGEKLGEVLAAMA-KGGMSPDAIHLIGHSLGSHISG 178
           N++  D S      Y  +T   R +G ++ E++  +  + G +P + +L+G SLG+HISG
Sbjct: 643 NVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGFSLGAHISG 702

Query: 179 FAGKTFTTLTGLQVGRISGLDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYG 343
           + G+     TG ++ RI+GLDPA   F N   ++RL  +DA +VDV+HTD  + G
Sbjct: 703 YVGRRIAK-TGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTDMDLAG 756


>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
          Length = 291

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = +2

Query: 2   NILALDGSSLIRWLYLHSTTYVRFIGEKLGEVLAAMAK--GGMSPDAIHLIGHSLGSHIS 175
           N++ +D     +  Y+ +    R +G ++   +  +    G     A H IG SLG+HIS
Sbjct: 126 NVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSIGFSLGAHIS 185

Query: 176 GFAGKTFTTLTGLQVGRISGLDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEP 355
           G+ G+    + G  + RI+GLDPA   F     ++RL   DA++VDVIHT   V+G+  P
Sbjct: 186 GYVGQRLKRI-GRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHT-SYVFGITAP 243

Query: 356 CG 361
            G
Sbjct: 244 HG 245


>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
          Length = 714

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   NILALDGSSLIRWLYLHSTTYVRFIGEKLGEVLAAMA-KGGMSPDAIHLIGHSLGSHISG 178
           N++ +D      + +  +    R +G +   +L  +  + G     +H+IG S G+H++G
Sbjct: 145 NVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHVAG 204

Query: 179 FAGKTFTTLTGLQVGRISGLDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEPC 358
           + G+      G  + RI+ LDPA   F     ++RL  +DA +VDVIHT    YG+    
Sbjct: 205 YVGRRMKK-RGRMIDRITALDPAAMWFHKHHEDVRLDTSDALFVDVIHTSAD-YGITSTI 262

Query: 359 G 361
           G
Sbjct: 263 G 263


>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 67

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +2

Query: 119 GMSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQVGRISG 235
           G +P +  +IG SLG H++G+AG      TGL++GRISG
Sbjct: 13  GNTPSSFTVIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51


>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
          Length = 131

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
 Frame = +2

Query: 2   NILALDGSSLIRWLYLHSTTY--VRFIGEKLGEVLAAMAKG-GMSPDAIHLIGHSLGSHI 172
           N++ +D  S    L L+       R +G +L E++  + +        +HLIGHSLG+H+
Sbjct: 55  NVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHV 114

Query: 173 SGFAGKTFTTLTGLQVGRIS 232
           +G+AG+    L+G +VGRI+
Sbjct: 115 AGYAGE---RLSG-KVGRIT 130


>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
          Length = 408

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 236 LDPAGPCFSNIPAELRLKHTDAKYVDVIHTDGGVYGLKEPCG 361
           LDPAG  F N   ++RL  +DA++VDV+HTD    G     G
Sbjct: 2   LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSG 43


>SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)
          Length = 360

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = +2

Query: 122 MSPDAIHLIGHSLGSHISGFAGKTFTTLTGLQVGRISGLDPAGPCFSNIPAEL------- 280
           M+PD   L G  +G  +S    +  +TL       +  LDP+    ++I A L       
Sbjct: 145 MTPDLKTLSGDLIGQLLSATVNEKNSTLLTALSSNVKFLDPSKLNLNDIKASLSFKDGKV 204

Query: 281 RLKHTDAKYVDVIHTDGGVYGLKE 352
            LK  + KY D+    GG +G  +
Sbjct: 205 ALKPMNLKYQDINMVVGGTHGFDQ 228


>SB_52448| Best HMM Match : X (HMM E-Value=1.7)
          Length = 549

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = -3

Query: 315 TSTYLASVCLRRSSAGILLKQGPAGSSPDILPT*SPVSVVNVL 187
           +ST LASVC   S AG      P  S+   L T SP+S V +L
Sbjct: 50  SSTSLASVCSGLSLAGSTPLMTPLVSTLSTLATTSPLSAVPIL 92


>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3464

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 62  TWSNGGTANG*ESCRPGPRC 3
           +W  GG  +G   CRPG +C
Sbjct: 106 SWRGGGVRSGFGKCRPGTKC 125


>SB_870| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09)
          Length = 334

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 2   NILALDGSSLIRWLYLHSTTYVRFI 76
           NI AL G+SLI WL L S T  R +
Sbjct: 36  NISALVGNSLILWLILRSRTLRRAV 60


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,168,991
Number of Sequences: 59808
Number of extensions: 372762
Number of successful extensions: 953
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)