Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A11
         (319 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82...    27   0.82 
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489...    27   3.2  
01_06_1199 + 35355690-35355732,35355793-35355930,35356366-353563...    26   7.4  
06_02_0107 - 11904636-11904699,11904940-11905013,11905671-119058...    25   9.7  
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458...    25   9.7  

>05_01_0119 +
           820566-820739,822708-822737,823153-823266,823341-823433,
           823521-823586,824076-824174,824480-824559,825039-825151,
           825600-825688,825955-826041,826128-826130,826285-826383
          Length = 348

 Score = 26.6 bits (56), Expect(2) = 0.82
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 203 LIILFTISSIARYYIKFTIFTILCLLFAT 289
           +IIL ++++ ++++I +TI T   L FAT
Sbjct: 281 VIILSSVATASQFFISYTIRTFGALTFAT 309



 Score = 21.0 bits (42), Expect(2) = 0.82
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 131 FKGIFIDITNMSGFNVVLGCVMAL 202
           FKG  ++I N   +  +  CV++L
Sbjct: 232 FKGYDMEIHNQIFYTTMCSCVLSL 255


>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
            28649069-28649144,28649356-28649426,28649524-28649589,
            28649677-28649766,28649874-28650050,28650513-28650548
          Length = 1442

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -1

Query: 271  QNSEYCKLYIVSSDRADREQNDQQRHDTTQ-NYVETRHVCDVDENSFKKN 125
            ++S    ++ V+S    R+  DQ++ DT Q   VETR V D ++   K+N
Sbjct: 874  EDSTMLNVFEVASKLIKRDL-DQEKQDTLQPGEVETRTVLDSNDKDTKEN 922


>01_06_1199 +
           35355690-35355732,35355793-35355930,35356366-35356389,
           35356450-35356587,35356974-35357056,35358881-35358922,
           35359151-35359231,35359319-35359414,35359530-35359736,
           35359810-35359963,35360170-35360373,35361037-35361921,
           35362025-35362071
          Length = 713

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 277 QTQNSEYCKLYIVSSDRADREQNDQQRHDTTQNYVETRHV 158
           + +N+   +L I+  + A  +   QQR+ T +  +E +HV
Sbjct: 621 EVENTTVNELQILDPEIAKSKGRPQQRYKTIREQIEEKHV 660


>06_02_0107 -
           11904636-11904699,11904940-11905013,11905671-11905802,
           11910309-11911018,11911110-11911852,11911936-11913753,
           11914037-11914338
          Length = 1280

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 119 SINYTFNFIFLNQLICEYVHRCTLQK 42
           S++Y  +++  N+++C  +  CT+QK
Sbjct: 125 SVHYPSDYLGPNEVLCYILRVCTIQK 150


>01_06_0840 + 32343700-32344138,32345329-32345419,32345584-32345866,
            32346023-32346097,32346470-32346514,32346889-32346979,
            32347060-32347118,32347621-32347704,32348109-32348168,
            32348585-32348637,32348724-32348757,32349334-32350335,
            32350477-32351035,32351873-32352372,32352793-32353200
          Length = 1260

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -1

Query: 295  WSGSK*QTQNSEYCKLYIVSSDRADREQNDQQRHDTTQNYVETRHVCDVDENSFKKN 125
            W  +K + Q +++C  Y VSS+  +   N +++    QN +  R    VD ++   N
Sbjct: 901  WRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQ---LQNELAQRGFVPVDASACSLN 954


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,393,073
Number of Sequences: 37544
Number of extensions: 91525
Number of successful extensions: 193
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)