Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A11
(319 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30959| Best HMM Match : SRP54 (HMM E-Value=5.2e-25) 27 2.5
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.5
SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43) 27 3.3
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06) 27 3.3
SB_42634| Best HMM Match : Trypan_PARP (HMM E-Value=0.12) 27 4.4
SB_6363| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
SB_45875| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
SB_45533| Best HMM Match : SAP (HMM E-Value=0.55) 26 7.6
SB_32809| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
SB_3693| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
>SB_30959| Best HMM Match : SRP54 (HMM E-Value=5.2e-25)
Length = 440
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 196 GAADHFVHDQLYR*ILYKVYNIHYFVFVICYRSNAI 303
G ++ F HD L + YK+ N VFVI Y S+ I
Sbjct: 104 GGSNAFTHDSLT--LKYKLDNEFELVFVIIYNSSGI 137
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 250 LYIVSSDRADREQNDQQRHDTTQNYVET 167
L+ VSS D +Q Q DT Q+ VET
Sbjct: 6351 LFAVSSSSPDADQTFQHMQDTLQSVVET 6378
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 104 FNFIFLNQLICEYVHRCTLQK*IFRHAVKRP 12
+ + L+ L+C + C L K +F H RP
Sbjct: 1405 YTCVALSLLVCRKLFACVLGKKLFEHGGTRP 1435
>SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43)
Length = 1402
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 277 QTQNSEYCKLYIVSSDRADREQNDQQRHDTTQN 179
QTQ+ + + SSD+ D Q+D+QR T N
Sbjct: 626 QTQSQQPSASSLPSSDKRDNAQHDKQRMGTGAN 658
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 242 YIKFTIFTILCLLFATAPMPLMLL 313
++ FT+ IL LLF +P+MLL
Sbjct: 1016 HLPFTVVAILMLLFFVLSLPIMLL 1039
>SB_38453| Best HMM Match : Sulfatase (HMM E-Value=3.1e-06)
Length = 473
Score = 27.1 bits (57), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 166 GFQRSFGLCHGAADHFVHDQ 225
GF +G +GA DHF H++
Sbjct: 179 GFDTFYGFYNGAEDHFTHER 198
>SB_42634| Best HMM Match : Trypan_PARP (HMM E-Value=0.12)
Length = 436
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/37 (21%), Positives = 21/37 (56%)
Frame = +2
Query: 173 NVVLGCVMALLIILFTISSIARYYIKFTIFTILCLLF 283
+V++ V+ ++++F + YY K + +LC ++
Sbjct: 383 HVIVAVVVVHVVLVFVTDFVVGYYAKSKVLILLCQIY 419
>SB_6363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 238 ILYKVYNIHYFVFVICYRSNAIDAVK 315
+ Y Y I+Y + CY NA+ A++
Sbjct: 92 LAYTQYAINYTQYATCYTRNALHAIR 117
>SB_45875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 238 ILYKVYNIHYFVFVICYRSNAIDAVK 315
+ Y Y I+Y + CY NA+ A++
Sbjct: 32 LAYTQYAINYTQYATCYTRNALHAIR 57
>SB_45533| Best HMM Match : SAP (HMM E-Value=0.55)
Length = 371
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 277 QTQNSEYCKLY--IVSSDRADREQNDQQRHDTTQNYVETRHVCDVDE 143
+T S C ++ +V S+R+D +++D DT + CD D+
Sbjct: 254 ETVQSSSCIMFESLVESERSDSDRSDSTEGDTMPSKGSETAKCDQDK 300
>SB_32809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 196 GAADHFVHDQLYR*ILYKVYNIHYFVFVIC 285
G + +F H QL+ L ++ H FVF++C
Sbjct: 55 GESYNFSHKQLFIGALAELLASHVFVFLVC 84
>SB_3693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 104 FNFIFLNQLICEYVHRCTLQK*IFRHAVKRP 12
+ + L+ L+C + C L K +F H RP
Sbjct: 381 YTCVALSLLVCRKLFACVLGKKLFEHGGTRP 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,962,332
Number of Sequences: 59808
Number of extensions: 119639
Number of successful extensions: 338
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 413004273
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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