SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A10
         (137 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   2.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   2.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   2.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    18   8.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    18   8.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    18   8.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    18   8.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    18   8.0  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 134 KKRKNIRQNFHSEVASL 84
           KK  NI+ NF  + ASL
Sbjct: 56  KKIYNIQNNFEYDTASL 72


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  RCHFRMKILANIFSFF 134
           + + +M ILA IF FF
Sbjct: 18  KSYSKMLILAQIFGFF 33


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  RCHFRMKILANIFSFF 134
           + + +M ILA IF FF
Sbjct: 18  KSYSKMLILAQIFGFF 33


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 114 PKFSFGSGISIWE 76
           P+FS G G   W+
Sbjct: 72  PRFSSGVGRKAWK 84


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 114 PKFSFGSGISIWE 76
           P+FS G G   W+
Sbjct: 72  PRFSSGVGRKAWK 84


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 99  RMKILANIFSFF 134
           ++ ILA IF FF
Sbjct: 39  KVVILAQIFGFF 50


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 99  RMKILANIFSFF 134
           ++ ILA IF FF
Sbjct: 39  KVVILAQIFGFF 50


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 99  RMKILANIFSFF 134
           ++ ILA IF FF
Sbjct: 39  KVVILAQIFGFF 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,006
Number of Sequences: 336
Number of extensions: 182
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 26
effective length of database: 113,849
effective search space used:  2163131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)

- SilkBase 1999-2023 -