Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A10
         (137 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    21   4.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           21   7.0  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 134 KKRKNIRQNFHSEVASLYGKEV 69
           +K KN++++   +  +L GKEV
Sbjct: 329 RKLKNLQKSIRDDEQALAGKEV 350


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 72  LFPI*RCHFRMKILAN 119
           +F + +CH +M+ LAN
Sbjct: 640 VFDLRQCHLQMQSLAN 655


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,638
Number of Sequences: 2352
Number of extensions: 482
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 25
effective length of database: 505,179
effective search space used: 10103580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)