Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A07
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 174 PEIKPKTPFGQMPLLEIDGK 233
           P  KP+TPF    LL ++ K
Sbjct: 114 PNRKPRTPFTTQQLLALEKK 133


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 355 QTPPPSITRKTRR*KPRNWQNSARPNTSSSLR 450
           Q  P    R     +PRN  N A P+TS++++
Sbjct: 15  QEMPTWFVRWLNSQQPRNVPNFAAPSTSTAVQ 46


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 51  LTMPNVVFYYFPVKAL 98
           +  P + FYY P+K L
Sbjct: 126 IVKPIIAFYYKPIKTL 141


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 328  TWSSLTIFVQTPPPSITRKTRR*KPRNWQNSARPNTSS 441
            TW S T        + TR+T   +P     + RP T++
Sbjct: 1041 TWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTN 1078


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,193
Number of Sequences: 336
Number of extensions: 2921
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)