Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A06
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56FD2 Cluster: PREDICTED: similar to Selenoprot... 73 7e-12
UniRef50_UPI00015B4977 Cluster: PREDICTED: similar to selenoprot... 70 4e-11
UniRef50_A5J2A1 Cluster: Selenoprotein M; n=1; Litopenaeus vanna... 70 5e-11
UniRef50_Q4A3I8 Cluster: Selenoprotein M; n=1; Suberites domuncu... 67 3e-10
UniRef50_Q4PMN9 Cluster: Salivary selenoprotein M; n=1; Ixodes s... 66 5e-10
UniRef50_Q8WWX9 Cluster: Thioredoxin-like selenoprotein M precur... 56 9e-07
UniRef50_Q8H6T5 Cluster: Selenoprotein SelM2; n=1; Chlamydomonas... 47 3e-04
UniRef50_O60613 Cluster: 15 kDa selenoprotein precursor; n=29; E... 41 0.026
UniRef50_Q8H6T0 Cluster: Selenoprotein SelM1; n=1; Chlamydomonas... 36 0.75
UniRef50_UPI00015B5DBA Cluster: PREDICTED: similar to CG7484; n=... 35 1.7
UniRef50_UPI0000D9C91D Cluster: PREDICTED: similar to selenoprot... 35 1.7
UniRef50_Q9ZDZ3 Cluster: ACRIFLAVIN RESISTANCE PROTEIN D; n=14; ... 33 5.3
UniRef50_A5I0A1 Cluster: Putative serine peptidase; n=4; Clostri... 33 5.3
UniRef50_A3HU39 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q03860 Cluster: Golgi apparatus membrane protein TVP15;... 33 7.0
>UniRef50_UPI0000D56FD2 Cluster: PREDICTED: similar to Selenoprotein
M precursor (Protein SelM); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Selenoprotein M
precursor (Protein SelM) - Tribolium castaneum
Length = 112
Score = 72.5 bits (170), Expect = 7e-12
Identities = 36/97 (37%), Positives = 49/97 (50%)
Frame = +1
Query: 70 LAIVVSNAYDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXX 249
LA+ + A + S I AR+ESC C LNRLP+VK F+ +D P Y+ E K I GAPP
Sbjct: 15 LALASAEAANDSKIARARVESCPSCKLNRLPEVKAFIYEDLPKYDNTEFKKIQGAPPVLL 74
Query: 250 XXXXXXXXXXXXXXXXXXXXXCNELVESRGFIKKSSK 360
CN L++S+GF K+ +
Sbjct: 75 FLNDADEIVEQHSLEKFSRQECNNLLKSKGFNIKNKE 111
>UniRef50_UPI00015B4977 Cluster: PREDICTED: similar to selenoprotein
M; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
selenoprotein M - Nasonia vitripennis
Length = 117
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 70 LAIVVSNAYDTSDIVS-ARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXX 246
L+++ A+ + + S A +ESCRGC LNRLP VK F+++D P Y+ E K I GAPP
Sbjct: 16 LSVLTDLAFASKGMYSRAVVESCRGCQLNRLPDVKAFILEDVPLYDNAEFKHIQGAPPEL 75
Query: 247 XXXXXXXXXXXXXXXXXXXXXXCNELVESRGFIKKSSKSD 366
CNEL+ +GF K D
Sbjct: 76 VLYDHAEKEIERLQIGLLTREECNELMYEKGFKKSKPIKD 115
>UniRef50_A5J2A1 Cluster: Selenoprotein M; n=1; Litopenaeus
vannamei|Rep: Selenoprotein M - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 131
Score = 69.7 bits (163), Expect = 5e-11
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +1
Query: 52 ILITLGLAIVVSNAYDTSD--IVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFI 225
+L+ LG + A + + I AR+ESC GC LNRLP+VK+F+ +D P + + K I
Sbjct: 8 LLLLLGAVFSYTLAEELRETAIAKARVESCGGCRLNRLPEVKKFIHEDIPLFHNAKFKQI 67
Query: 226 NGAPPXXXXXXXXXXXXXXXXXXXXXXXXCNELVESRGFIKKSSKSD 366
GAPP CN+L+ +GF KKSS +
Sbjct: 68 GGAPPELVLLNRFDQVVERLPLDKLSREECNKLMLKKGFYKKSSPEE 114
>UniRef50_Q4A3I8 Cluster: Selenoprotein M; n=1; Suberites
domuncula|Rep: Selenoprotein M - Suberites domuncula
(Sponge)
Length = 123
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +1
Query: 64 LGLAIVVSNAYDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPP 240
L L + VS A +I AR+ESC GC LN LP+VKRF+ D P+Y LE+K+I GA P
Sbjct: 6 LFLTLCVSLAIGVGEIKKARLESCSGCRLNSLPKVKRFINDHLPDYPDLEIKYIGGADP 64
>UniRef50_Q4PMN9 Cluster: Salivary selenoprotein M; n=1; Ixodes
scapularis|Rep: Salivary selenoprotein M - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 129
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/85 (38%), Positives = 42/85 (49%)
Frame = +1
Query: 109 IVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXXXX 288
IV AR+ESC GC LN P+VK+FV DD P + +E K I GA P
Sbjct: 28 IVKARVESCGGCRLNAYPEVKKFVYDDIPLFHNVEFKVIGGAKPEVLFLNMNDEEVERHS 87
Query: 289 XXXXXXXXCNELVESRGFIKKSSKS 363
CN+L+ RGF KK ++
Sbjct: 88 LEGRSRDECNQLLLDRGFEKKKQEA 112
>UniRef50_Q8WWX9 Cluster: Thioredoxin-like selenoprotein M
precursor; n=15; Euteleostomi|Rep: Thioredoxin-like
selenoprotein M precursor - Homo sapiens (Human)
Length = 145
Score = 55.6 bits (128), Expect = 9e-07
Identities = 29/85 (34%), Positives = 39/85 (45%)
Frame = +1
Query: 103 SDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXX 282
S + AR+E+C GC LNRL +VK FV D P Y L +K + GA P
Sbjct: 35 SGLTRARVETCGGCQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELER 94
Query: 283 XXXXXXXXXXCNELVESRGFIKKSS 357
N LV+ GF +K++
Sbjct: 95 IPLSEMTREEINALVQELGFYRKAA 119
>UniRef50_Q8H6T5 Cluster: Selenoprotein SelM2; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelM2 - Chlamydomonas
reinhardtii
Length = 138
Score = 47.2 bits (107), Expect = 3e-04
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +1
Query: 49 LILITLGLAIVVSNAYDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN---YERLEVK 219
L L L LA++ A + + SC GC LN LP+VK+F+ D YE L V
Sbjct: 4 LALALLALALIAHEA--NAKVARGEFISCPGCRLNHLPEVKKFIRGDIEKDKAYENLTVN 61
Query: 220 FINGAPPXXXXXXXXXXXXXXXXXXXXXXXXCNELVESRGFIKK 351
F+ G P + LV+S+GF ++
Sbjct: 62 FVPGRTPELVLYDENGVEIERMFVDKLKYDELHTLVQSKGFKRR 105
>UniRef50_O60613 Cluster: 15 kDa selenoprotein precursor; n=29;
Eumetazoa|Rep: 15 kDa selenoprotein precursor - Homo
sapiens (Human)
Length = 162
Score = 40.7 bits (91), Expect = 0.026
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 94 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 240
++T + + I GC L R PQV+ FV D P + L++K++ G+ P
Sbjct: 77 FETKKLYAGAILEVCGCKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 126
>UniRef50_Q8H6T0 Cluster: Selenoprotein SelM1; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelM1 - Chlamydomonas
reinhardtii
Length = 140
Score = 35.9 bits (79), Expect = 0.75
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 130 SCRGCSLNRLPQVKRFVMDDA-PN-YERLEVKFINGAPP 240
SC GC L LP+VKRF+ D PN Y + V F G P
Sbjct: 42 SCSGCRLKHLPEVKRFLYDVVRPNLYHGVTVDFTPGRSP 80
>UniRef50_UPI00015B5DBA Cluster: PREDICTED: similar to CG7484; n=2;
Apocrita|Rep: PREDICTED: similar to CG7484 - Nasonia
vitripennis
Length = 155
Score = 34.7 bits (76), Expect = 1.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 118 ARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 240
A +E C C PQ++ F+ D PN Y+ L+++++ G P
Sbjct: 79 AVLEVCT-CKFGAYPQIQAFIKSDRPNKYKNLQIRYVRGLDP 119
>UniRef50_UPI0000D9C91D Cluster: PREDICTED: similar to selenoprotein
M precursor; n=1; Macaca mulatta|Rep: PREDICTED: similar
to selenoprotein M precursor - Macaca mulatta
Length = 119
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = +1
Query: 160 PQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXXXXXXXXXXXXCNELVESRG 339
PQVK FV D P Y L +K + GA P N LV+ G
Sbjct: 28 PQVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELERIPLSEMTREEINALVQELG 87
Query: 340 FIKKSS 357
F +K++
Sbjct: 88 FYRKAA 93
>UniRef50_Q9ZDZ3 Cluster: ACRIFLAVIN RESISTANCE PROTEIN D; n=14;
Rickettsia|Rep: ACRIFLAVIN RESISTANCE PROTEIN D -
Rickettsia prowazekii
Length = 1008
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -2
Query: 224 INFTSSRS*FGASSITNLFTCGRRFNEHPLQLSILAETISEVSYAFETTMARPSVIKM 51
+++ +S+S G+SSIT F R + L L+ + IS++SY F M PSV K+
Sbjct: 77 LDYITSQSSTGSSSITLSF---RLSTDIELALNDVRSKISDISYMFPQDMKAPSVTKL 131
>UniRef50_A5I0A1 Cluster: Putative serine peptidase; n=4;
Clostridium botulinum|Rep: Putative serine peptidase -
Clostridium botulinum A str. ATCC 3502
Length = 535
Score = 33.1 bits (72), Expect = 5.3
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 52 ILITLGLAIVVSNAYDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFI 225
I++ + N D SD+VS S + S N+ + ++D+A N+ +LE+KFI
Sbjct: 201 IMLLYNEKLKYKNLVDYSDVVSM---SLKEASKNKENKFNHIIVDEAQNFTKLELKFI 255
>UniRef50_A3HU39 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 302
Score = 33.1 bits (72), Expect = 5.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 279 LQFSVTFT--QQNQFWWRAVYKLHL*PLVVWCIVHN 178
L+FS+ F + FWW Y+L L P +VW I N
Sbjct: 206 LKFSLDFESIKSKYFWWGMGYRLILAPFIVWLIYQN 241
>UniRef50_Q03860 Cluster: Golgi apparatus membrane protein TVP15;
n=2; Saccharomyces cerevisiae|Rep: Golgi apparatus
membrane protein TVP15 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 143
Score = 32.7 bits (71), Expect = 7.0
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = -3
Query: 550 NITLGKTGMFYNIGLLAHIFKNMNLLILKQHCCEIKIAIVINDFSIF*TLQSYNNISFXF 371
NI++G + + L +IF N+N+ +L + + + IV +F + L Y + F F
Sbjct: 13 NISIGCIDIIAALSQLTYIFTNLNVFLLAVYGLALSVPIVYLEFKVPSNLYRYASFYFSF 72
Query: 370 I 368
+
Sbjct: 73 L 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,720,671
Number of Sequences: 1657284
Number of extensions: 9214834
Number of successful extensions: 16940
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16935
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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