Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A05
(580 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 111 5e-26
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 107 2e-24
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 86 4e-18
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 83 2e-17
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 76 4e-15
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 74 2e-14
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 31 0.12
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 29 0.65
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 0.86
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 26 3.5
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 26 4.6
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 26 4.6
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 8.0
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 111 bits (268), Expect = 5e-26
Identities = 49/108 (45%), Positives = 75/108 (69%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+VT+DM + KEE FGP++ + KF + +E+ IRR NN+ YGLA+GV T +++ A++ +
Sbjct: 390 NVTEDMAVGKEEIFGPVLAVIKF--KTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNA 447
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 424
++AGTV+VN YN PFGG+K+SG G++LG L Y +TK V +
Sbjct: 448 LEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGLTNYTQTKAVHI 495
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 107 bits (256), Expect = 2e-24
Identities = 47/110 (42%), Positives = 73/110 (66%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
D +++M I KEE FGP++ ISKF + ++ I +ANNT YGLA+ FT+D+ RA + ++
Sbjct: 385 DCSENMTIVKEEIFGPVVAISKFKTE--DEAIEKANNTTYGLAAMCFTKDLERAHRVSDE 442
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVEY 430
++AG VF+N+ +D+ APFGG K SG G +LG + Y + K V + +
Sbjct: 443 LEAGMVFINSTENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAVHINF 492
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 85.8 bits (203), Expect = 4e-18
Identities = 40/103 (38%), Positives = 68/103 (66%)
Frame = +2
Query: 116 MYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGT 295
M I++EE+FGP+ + KF + ++V+ AN++ GLA +F++D+SR + E + G
Sbjct: 395 MLISEEETFGPVGALFKFDTE--DEVVAWANDSPVGLAGYLFSKDISRVFRVGEALQVGM 452
Query: 296 VFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 424
V NT +DV +PFGG K+SGFG++ + ++EYL K++T+
Sbjct: 453 VGCNTGLVSDVLSPFGGVKESGFGREGSKYGISEYLDIKSLTI 495
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 83.4 bits (197), Expect = 2e-17
Identities = 41/108 (37%), Positives = 65/108 (60%)
Frame = +2
Query: 104 VTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERI 283
VT DM +A EE+FGP+ + KF + E+VI AN+++ GLA VFT ++S + A+ +
Sbjct: 386 VTQDMLVASEETFGPLASVFKFD--DTEEVIEWANDSDVGLAGYVFTNNLSTMIHVAKEL 443
Query: 284 DAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVE 427
+ G V N + FGG KQSGFGK+ G+ + E++ K + ++
Sbjct: 444 EVGLVGANIEMVDEPFISFGGIKQSGFGKEAGRLGVQEFMVVKEINLK 491
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 75.8 bits (178), Expect = 4e-15
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
D T++M IA+EE F PI ++ F +++ E + AN TE+GL + VF RD F +
Sbjct: 363 DATNEMKIAQEECFAPIALV--FRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDN 420
Query: 281 IDAGTVFVNTYNKTDVAA-PFGGFKQSGFGKDLGQEALNEYLKTKTVTVE 427
++ G V VN + + PFGG K+SG+G+ G E L +K + +
Sbjct: 421 LETGMVAVNDFGAFYLLQMPFGGCKKSGYGRFAGYEGLRGICNSKAIAYD 470
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 73.7 bits (173), Expect = 2e-14
Identities = 36/100 (36%), Positives = 57/100 (57%)
Frame = +2
Query: 122 IAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVF 301
I +EE FGP++ + F + E+ + AN++EYGL SGVF+ + F+ I+AG
Sbjct: 399 IWREEIFGPVLAVKTFHTN--EEALELANDSEYGLGSGVFSTNPKTLEFFSNNIEAGMCS 456
Query: 302 VNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVT 421
+N Y+ P+ G+K SG G L + NEY++ K +T
Sbjct: 457 LNNYHVVTHELPWIGWKHSGLGVGLSKHGYNEYMRLKQIT 496
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 31.1 bits (67), Expect = 0.12
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 146 PIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTD 325
P+ I + SS +++ I NT+ GL+S D S+ F D T+F +Y+KT+
Sbjct: 651 PVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLF--SYSKTE 708
Query: 326 VAAPF 340
+
Sbjct: 709 TCLTY 713
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.7 bits (61), Expect = 0.65
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 306 LTNTVPASMRSANCSARDTSRVNTPLARPYSVLFAR 199
+T +P+S S+N S +DT+ VN+P A +S F +
Sbjct: 1 MTFRIPSSQESSNKSEKDTT-VNSPNASSFSSFFKK 35
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 28.3 bits (60), Expect = 0.86
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 315 LYVLTNTVPASMRSA-NCSARDTSRVNTPLARPYSVLFARRITSSMF 178
LYV + S+ S+ C+A S+ N RPYSV+ +R S F
Sbjct: 936 LYVYKSDATNSLASSIRCTADKISKSNFDFRRPYSVIPSRMTGRSSF 982
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 188 DVIRRANNTEYGLASGV 238
D+I+R +TEYG+A+G+
Sbjct: 239 DIIQRKGSTEYGVAAGL 255
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 4.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 498 HSVNNNYHHGNAFYKTFCKSSHYD 569
+S+N HH N F +F S+++D
Sbjct: 737 YSINKVVHHLNYFMNSFLSSTYFD 760
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 4.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 95 NTVSAWKXXNPXCXGRXRVXSPL 27
NT+ W +P C G V SP+
Sbjct: 134 NTIRLWDLRSPNCQGLLNVSSPV 156
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.0 bits (52), Expect = 8.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 178 PAAKFADNHDRSERFLLSDVHVVG 107
PA + +N + ERFL+ D+ V+G
Sbjct: 475 PATNY-ENFEYEERFLIQDLEVIG 497
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,658,798
Number of Sequences: 5004
Number of extensions: 26157
Number of successful extensions: 98
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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