Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A05
(580 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 109 2e-24
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 107 7e-24
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 99 2e-21
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 91 5e-19
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 86 2e-17
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 85 4e-17
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 77 9e-15
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 77 9e-15
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 66 2e-11
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 66 2e-11
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 64 6e-11
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 64 6e-11
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 52 2e-07
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 44 1e-04
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 44 1e-04
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 42 2e-04
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 40 0.002
At3g52250.1 68416.m05742 myb family transcription factor contain... 31 0.73
At1g48560.1 68414.m05430 expressed protein 30 0.97
At1g23230.1 68414.m02906 expressed protein 30 1.3
At3g06250.1 68416.m00718 far-red impaired responsive protein, pu... 28 3.9
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 109 bits (261), Expect = 2e-24
Identities = 52/106 (49%), Positives = 77/106 (72%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+V DDM IA++E FGP+ I KFS ++++VI+RAN T+YGLA+GVFT+++ A + +
Sbjct: 425 NVKDDMLIAQDEIFGPVQSILKFS--DVDEVIKRANETKYGLAAGVFTKNLDTANRVSRA 482
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
+ AGTV+VN ++ D A PFGG+K SG G++ G +LN YL+ K V
Sbjct: 483 LKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAV 528
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 107 bits (256), Expect = 7e-24
Identities = 49/106 (46%), Positives = 73/106 (68%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DV DDM IA +E FGP+ I KF +++++VI RANN+ YGLA+GVFT+++ A +
Sbjct: 421 DVKDDMLIATDEIFGPVQTILKF--KDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRA 478
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
+ GTV++N ++ D + PFGG+K SG G++ G +LN YL+ K V
Sbjct: 479 LRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAV 524
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/108 (42%), Positives = 74/108 (68%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DVT+DM I ++E FGP+M + KF + +E+ I+ ANNT+YGLA+G+ ++D+ +
Sbjct: 388 DVTEDMKIYQDEIFGPVMSLMKF--KTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRS 445
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 424
I AG ++VN Y D+ P+GG+K SG ++ G +AL+ YL+TK+V +
Sbjct: 446 IKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVM 493
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 91.1 bits (216), Expect = 5e-19
Identities = 43/108 (39%), Positives = 66/108 (61%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DVT M I +EE FGP++ + F+S ++ I AN++ YGL + V + D R + +E
Sbjct: 382 DVTTSMQIWREEVFGPVLCVKTFASE--DEAIELANDSHYGLGAAVISNDTERCDRISEA 439
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 424
+AG V++N AP+GG K+SGFG++LG+ L+ YL K VT+
Sbjct: 440 FEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTL 487
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 85.8 bits (203), Expect = 2e-17
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+VT M I +EE FGP + + FS+ ++ I+ AN+++YGLA V + D+ R + ++
Sbjct: 382 NVTTSMEIWREEVFGPALCVKTFSTE--DEAIQLANDSQYGLAGAVLSNDLERCDRVSKA 439
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVT 421
AG V+VN AP+GG K+SGFG++LG+ L YL K VT
Sbjct: 440 FQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVT 486
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 84.6 bits (200), Expect = 4e-17
Identities = 45/106 (42%), Positives = 67/106 (63%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DV+D+M ++KEE FGP+ + +F + ED IR AN+T GLA+ +FT V R+ + E
Sbjct: 417 DVSDNMIMSKEEIFGPVAPLIRFKTE--EDAIRIANDTIAGLAAYIFTNSVQRSWRVFEA 474
Query: 281 IDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
++ G V VN + APFGG KQSG G++ + ++EYL+ K V
Sbjct: 475 LEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYV 520
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 77.0 bits (181), Expect = 9e-15
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+V +M I KEE+FGPIM I +FS+ E+VI+ AN++ Y L VF+ RA Q A +
Sbjct: 422 NVNHNMKIMKEEAFGPIMPIMQFSTD--EEVIKLANDSRYALGCAVFSGSKHRAKQIASQ 479
Query: 281 IDAGTVFVNTY--NKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
I G +N + N + PFGG K SGFG+ G E L K+V
Sbjct: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSV 527
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 77.0 bits (181), Expect = 9e-15
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+V +M I KEE+FGPIM I +FS+ E+VI+ AN++ Y L VF+ RA Q A +
Sbjct: 422 NVNHNMKIMKEEAFGPIMPIMQFSTD--EEVIKLANDSRYALGCAVFSGSKHRAKQIASQ 479
Query: 281 IDAGTVFVNTY--NKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
I G +N + N + PFGG K SGFG+ G E L K+V
Sbjct: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSV 527
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +2
Query: 83 PILCSXDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRA 262
P+L +V DM IA EE FGP++ + + +S +E+ I N + +GL VFT+D+++A
Sbjct: 375 PLLLD-NVRPDMRIAWEEPFGPVVPVLRINS--VEEGINHCNASNFGLQGCVFTKDINKA 431
Query: 263 LQFAERIDAGTVFVNTY-NKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 424
+ ++ ++ GTV +N+ + PF G K SG G ++N K KT +
Sbjct: 432 ILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGVTNSINLMTKVKTTVI 486
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +2
Query: 83 PILCSXDVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRA 262
P+L +V DM IA EE FGP++ + + +S +E+ I N + +GL VFT+D+++A
Sbjct: 375 PLLLD-NVRPDMRIAWEEPFGPVVPVLRINS--VEEGINHCNASNFGLQGCVFTKDINKA 431
Query: 263 LQFAERIDAGTVFVNTY-NKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 424
+ ++ ++ GTV +N+ + PF G K SG G ++N K KT +
Sbjct: 432 ILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGVTNSINLMTKVKTTVI 486
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 64.1 bits (149), Expect = 6e-11
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+++ D + KEE F P++ + KF S + + N+ GL+S +FTR+ ++
Sbjct: 385 EISADAAVVKEELFAPVLYVLKFKS--FGEAVAINNSVPQGLSSSIFTRNPENIFRWIGP 442
Query: 281 I--DAGTVFVN-TYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVEY 430
+ D G V VN N ++ FGG K +G G++ G ++ +Y++ T T+ Y
Sbjct: 443 LGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 64.1 bits (149), Expect = 6e-11
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
+++ D + KEE F P++ + KF S + + N+ GL+S +FTR+ ++
Sbjct: 385 EISADAAVVKEELFAPVLYVLKFKS--FGEAVAINNSVPQGLSSSIFTRNPENIFRWIGP 442
Query: 281 I--DAGTVFVN-TYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVEY 430
+ D G V VN N ++ FGG K +G G++ G ++ +Y++ T T+ Y
Sbjct: 443 LGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Frame = +2
Query: 104 VTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERI 283
VT DM KEE FGP+++ + +S ++ I N +YG + +FT + A +F I
Sbjct: 481 VTPDMECYKEEIFGPVLVCMQANS--FDEAISIINKNKYGNGAAIFTSSGAAARKFQMDI 538
Query: 284 DAGTVFVNTYNKTDVAAPFGGF--KQSGFGKDL---GQEALNEYLKTKTVTVEY 430
+AG + +N V PF F ++ F DL G+ ++ + + KTVT ++
Sbjct: 539 EAGQIGINV--PIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQW 590
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DV D I EE FGP++ I + N+E+ + LA+ +FT + +FA
Sbjct: 336 DVPLDSLIMSEEIFGPLLPI--LTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393
Query: 281 IDAGTVFVN--TYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
+ AG + VN + PFGG +SG G G+ + + + K V
Sbjct: 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DV D I EE FGP++ I + N+E+ + LA+ +FT + +FA
Sbjct: 336 DVPLDSLIMSEEIFGPLLPI--LTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393
Query: 281 IDAGTVFVN--TYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
+ AG + VN + PFGG +SG G G+ + + + K V
Sbjct: 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 101 DVTDDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAER 280
DV + + +EE FGP++ I + + +ED + + LA+ +FT + QF +
Sbjct: 399 DVPEASSMMQEEIFGPLLPI--ITVQKIEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQD 456
Query: 281 IDAGTVFVN--TYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
+ AG + +N + T PFGG +SG G G+ + + K V
Sbjct: 457 VSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGV 504
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 113 DMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAG 292
D I EE FGPI+ I + R++++ I N LA FT D + + +G
Sbjct: 339 DSEIMNEEIFGPILPI--ITVRDIQESIGIINTKPKPLAIYAFTNDENLKTRILSETSSG 396
Query: 293 TVFVNTYNKTDV--AAPFGGFKQSGFGKDLGQEALNEYLKTKTV 418
+V N + A PFGG +SG G+ G+ + + + K +
Sbjct: 397 SVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAI 440
>At3g52250.1 68416.m05742 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 1677
Score = 30.7 bits (66), Expect = 0.73
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 74 SSMPILCSXDVTDDMY------IAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASG 235
SS P+ C V ++ I+++ S + KFSS+N + V++ AN T SG
Sbjct: 1312 SSEPLYCGLSVLSNVIVETPTEISRKGSGDQGATMPKFSSKNQDGVMQAANRTR---NSG 1368
Query: 236 VFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFG 343
+ ++ E + + V T N V+AP G
Sbjct: 1369 LEPESAPSGFRYPECLHHVPIEVCTENPIGVSAPRG 1404
>At1g48560.1 68414.m05430 expressed protein
Length = 643
Score = 30.3 bits (65), Expect = 0.97
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 268 LQRARHVPREHATSETVLRVVRATDYILHVPAAKFADNHDRSERFL 131
L R +PR HATS++ L VR + +P + A+ + S + L
Sbjct: 99 LDRENSLPRFHATSDSALGFVRDMAISIRMPLWRLAETNSSSAQIL 144
>At1g23230.1 68414.m02906 expressed protein
Length = 1615
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 393 FRASWPRSF-PKPDCLKPPKGAATSVLLYVLTNTVPASMRSANCSARDTS 247
F S+P+ P + PP S+LL ++ N +P S+NCS+R S
Sbjct: 1192 FSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGS 1241
>At3g06250.1 68416.m00718 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 764
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Frame = +2
Query: 23 RXGAXXRXXDXDKXGSXSSMPILCSXDVTDDMYIAKEESFGPI---MIISKFSSRNMEDV 193
+ A + D G S+ ++ D+++ + +E + G +++ F S+ ED+
Sbjct: 282 KKNAGMKKITDDVTGGLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAEDM 341
Query: 194 --IRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGF 349
G +F D SR+ + VF +Y K D + PF F
Sbjct: 342 GFFYAIELDSNGSCMSIFWAD-SRSRFACSQFGDAVVFDTSYRKGDYSVPFATF 394
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,550,018
Number of Sequences: 28952
Number of extensions: 132905
Number of successful extensions: 443
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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