Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_A03
         (281 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025996-1|AAH25996.1|  141|Homo sapiens hypothetical LOC441046 ...    31   0.68 
AK131302-1|BAD18470.1|  626|Homo sapiens protein ( Homo sapiens ...    31   0.68 
BC010619-1|AAH10619.1|  337|Homo sapiens MOCO sulphurase C-termi...    27   8.4  
AL606726-4|CAH71881.1|  337|Homo sapiens MOCO sulphurase C-termi...    27   8.4  
AL445423-3|CAH72119.1|  337|Homo sapiens MOCO sulphurase C-termi...    27   8.4  
AL445423-1|CAH72116.1|  262|Homo sapiens MOCO sulphurase C-termi...    27   8.4  
AK094105-1|BAC04286.1|  252|Homo sapiens protein ( Homo sapiens ...    27   8.4  
AK026043-1|BAB15333.1|  151|Homo sapiens protein ( Homo sapiens ...    27   8.4  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    27   8.4  

>BC025996-1|AAH25996.1|  141|Homo sapiens hypothetical LOC441046
           protein.
          Length = 141

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 27  FLTPWTAPKDLEGDVVFKVTIVKSYAVFWV-GIESAPVKGS 146
           FL  WT  +DL   VV ++    SYA+ WV G+++   +GS
Sbjct: 33  FLEQWT--QDLHTRVVLRIVSAHSYAIVWVNGVDALEHEGS 71


>AK131302-1|BAD18470.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16275 fis, clone NT2RI2027157, moderately
           similar to Mouse SDR2 mRNA. ).
          Length = 626

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 39  WTAPKDLEGDVVFKVTIVKSYAVFWVGI 122
           W AP        F VT+V+ Y ++WV I
Sbjct: 130 WNAPSSAPNHTQFLVTVVEKYKIYWVKI 157


>BC010619-1|AAH10619.1|  337|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
           CSR  L+   P +G  S + PL+ L S   C
Sbjct: 270 CSRCILTTVDPDTGVMSRKEPLETLKSYRQC 300


>AL606726-4|CAH71881.1|  337|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
           CSR  L+   P +G  S + PL+ L S   C
Sbjct: 270 CSRCILTTVDPDTGVMSRKEPLETLKSYRQC 300


>AL445423-3|CAH72119.1|  337|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
           CSR  L+   P +G  S + PL+ L S   C
Sbjct: 270 CSRCILTTVDPDTGVMSRKEPLETLKSYRQC 300


>AL445423-1|CAH72116.1|  262|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 262

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
           CSR  L+   P +G  S + PL+ L S   C
Sbjct: 195 CSRCILTTVDPDTGVMSRKEPLETLKSYRQC 225


>AK094105-1|BAC04286.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36786 fis, clone ADRGL2002857, moderately
           similar to Rattus norvegicus MG87 mRNA. ).
          Length = 252

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
           CSR  L+   P +G  S + PL+ L S   C
Sbjct: 185 CSRCILTTVDPDTGVMSRKEPLETLKSYRQC 215


>AK026043-1|BAB15333.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22390 fis, clone HRC07810. ).
          Length = 151

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
           CSR  L+   P +G  S + PL+ L S   C
Sbjct: 84  CSRCILTTVDPDTGVMSRKEPLETLKSYRQC 114


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = -2

Query: 160  NLMTXEPLTGADSIPTQKTA*LLTMVTLNTTSPSKSLGAVQGVRNSLS 17
            NL +   LT ++ IPT       T+V L+T SP+ SL A +G   +LS
Sbjct: 1194 NLPSTTSLTPSN-IPTSGAIGKSTLVPLDTPSPATSLEASEGGLPTLS 1240


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,249,467
Number of Sequences: 237096
Number of extensions: 514848
Number of successful extensions: 1158
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)