Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_A03
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein. 27 2.1
AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable abno... 27 2.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 26 3.6
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z98877-10|CAB63406.1| 314|Caenorhabditis elegans Hypothetical p... 25 6.3
Z81484-11|CAB03969.2| 365|Caenorhabditis elegans Hypothetical p... 25 6.3
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z73098-8|CAA97334.2| 303|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 25 8.4
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 25 8.4
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 25 8.4
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 25 8.4
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 25 8.4
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 25 8.4
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 25 8.4
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 25 8.4
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 25 8.4
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 25 8.4
>AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein.
Length = 1040
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 73 CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
C SP S +PSSGS+ NQ SLN C
Sbjct: 34 CDVSPNSMTSPSSGSDQNQNN----NSLNKC 60
>AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable
abnormal morphology protein19 protein.
Length = 1040
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 73 CSRSPLSRATPSSGSESNQPPLKVLXSLNSC 165
C SP S +PSSGS+ NQ SLN C
Sbjct: 34 CDVSPNSMTSPSSGSDQNQNN----NSLNKC 60
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 79 RSPLSRATPSSGSESNQPP 135
RSP R +PSS S S PP
Sbjct: 498 RSPRRRRSPSSSSRSRSPP 516
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 39 WTAPKDLEGDVVFKVTIVKSYAVFWVGIESAPVK 140
W AP+ G VVF+ +++++ +++ E VK
Sbjct: 138 WKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVK 171
>Z98877-10|CAB63406.1| 314|Caenorhabditis elegans Hypothetical
protein Y69H2.9 protein.
Length = 314
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 86 GDLEHNVAF*VLRSCPRGKKQSVCLI 9
G LE N A+ +L+ C +KQ C++
Sbjct: 108 GGLEINHAWAMLKDCHESRKQPTCIL 133
>Z81484-11|CAB03969.2| 365|Caenorhabditis elegans Hypothetical
protein C47A10.4 protein.
Length = 365
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 21 RLFLTPWTAPKDLEGDVVFKV 83
R + P+T PK+ EGD+ F++
Sbjct: 331 RKSIFPFTKPKETEGDIYFEM 351
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 70 LCSRSPLSRATPSSGSESNQP 132
+C++ P+ R + + S SNQP
Sbjct: 598 VCTKGPVGRPSSEASSSSNQP 618
>Z73098-8|CAA97334.2| 303|Caenorhabditis elegans Hypothetical
protein T21C9.7 protein.
Length = 303
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 106 SSGSESNQPPLKVLXSLNSCSVIITYLMSTLICITNI 216
+S +E + PL+V +++ C I Y M+ L + +
Sbjct: 79 NSSTEEDNFPLQVFFTIHYCMAFIQYFMTFLSSLNRL 115
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 528 ATLAMHSPLAAHTPSNMPGPSEPAIKL 554
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 596 ATLAMHSPLAAHTPSNMPGPSEPAIKL 622
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 596 ATLAMHSPLAAHTPSNMPGPSEPAIKL 622
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 596 ATLAMHSPLAAHTPSNMPGPSEPAIKL 622
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 596 ATLAMHSPLAAHTPSNMPGPSEPAIKL 622
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 596 ATLAMHSPLAAHTPSNMPGPSEPAIKL 622
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 596 ATLAMHSPLAAHTPSNMPGPSEPAIKL 622
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 154 ATLAMHSPLAAHTPSNMPGPSEPAIKL 180
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 619 ATLAMHSPLAAHTPSNMPGPSEPAIKL 645
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 619 ATLAMHSPLAAHTPSNMPGPSEPAIKL 645
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 64 ATLCSRSPLSRATPSSGSESNQPPLKV 144
ATL SPL+ TPS+ ++P +K+
Sbjct: 176 ATLAMHSPLAAHTPSNMPGPSEPAIKL 202
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 85 PLSRATPSSGSESNQPPLKVLXSLNSCSVIITYLMSTLICITNIKNIQQLYL 240
P+S ATP+ + S PP SL+ + YL + ITN+ N YL
Sbjct: 312 PVSCATPACINASTSPPSAFARSLHD----VFYLYG--LAITNLYNQDPAYL 357
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 52 RT*KATLCSRSPLSRATPSSGSESNQPPLKV 144
RT + +C S +PSS +E+ PP+ V
Sbjct: 32 RTSREYVCPLKSTSPQSPSSSTENEPPPVSV 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,187,605
Number of Sequences: 27780
Number of extensions: 85846
Number of successful extensions: 234
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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