Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P23
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK000635-1|BAA91300.1| 477|Homo sapiens protein ( Homo sapiens ... 31 2.0
U54999-1|AAB40385.1| 677|Homo sapiens LGN protein protein. 30 4.6
CR456786-1|CAG33067.1| 677|Homo sapiens GPSM2 protein. 30 4.6
BC027732-1|AAH27732.1| 677|Homo sapiens G-protein signaling mod... 30 4.6
AY136740-1|AAN01266.1| 677|Homo sapiens LGN protein protein. 30 4.6
AL449266-9|CAI14361.1| 684|Homo sapiens G-protein signalling mo... 30 4.6
AL449266-8|CAI14360.1| 213|Homo sapiens G-protein signalling mo... 30 4.6
Y17739-1|CAB50769.1| 368|Homo sapiens hepatocyte nuclear factor... 30 6.1
U96173-1|AAD00826.1| 465|Homo sapiens hepatocyte nuclear factor... 30 6.1
AF035581-1|AAD02033.1| 465|Homo sapiens hepatocyte nuclear fact... 30 6.1
BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocy... 29 8.1
AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene... 29 8.1
AY044164-1|AAK94675.1| 1244|Homo sapiens lymphocyte alpha-kinase... 29 8.1
AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4 de... 29 8.1
AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein. 29 8.1
AB075877-1|BAD38659.1| 227|Homo sapiens lymphocyte alpha-kinase... 29 8.1
AB040960-1|BAA96051.1| 801|Homo sapiens KIAA1527 protein protein. 29 8.1
>AK000635-1|BAA91300.1| 477|Homo sapiens protein ( Homo sapiens
cDNA FLJ20628 fis, clone KAT03903. ).
Length = 477
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +2
Query: 239 VVPLLKERRGEWYWFVHKQLVTRYYMERLSNGFGEIGELSGNVVNEGYNFGYMYHNGIPY 418
+V L K++ G V ++ T ++ G GEL +E +F + Y PY
Sbjct: 394 LVCLAKQKNGILAQKVESKINTDVQLDSQEK-IGVKGELFQEDDHEESHFDFPY-GSFPY 451
Query: 419 PVRPNHFHLDHPEYLGELEKIK 484
RP H+ H +L +L K+K
Sbjct: 452 VARPVHWQPGHTAFLVKLRKVK 473
>U54999-1|AAB40385.1| 677|Homo sapiens LGN protein protein.
Length = 677
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 137 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 232
+ Q + +YLHDY+ Y++H LT + +G
Sbjct: 58 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89
>CR456786-1|CAG33067.1| 677|Homo sapiens GPSM2 protein.
Length = 677
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 137 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 232
+ Q + +YLHDY+ Y++H LT + +G
Sbjct: 58 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89
>BC027732-1|AAH27732.1| 677|Homo sapiens G-protein signaling
modulator 2 (AGS3-like, C. elegans) protein.
Length = 677
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 137 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 232
+ Q + +YLHDY+ Y++H LT + +G
Sbjct: 58 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89
>AY136740-1|AAN01266.1| 677|Homo sapiens LGN protein protein.
Length = 677
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 137 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 232
+ Q + +YLHDY+ Y++H LT + +G
Sbjct: 58 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89
>AL449266-9|CAI14361.1| 684|Homo sapiens G-protein signalling
modulator 2 (AGS3-like, C. elegans) protein.
Length = 684
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 137 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 232
+ Q + +YLHDY+ Y++H LT + +G
Sbjct: 65 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 96
>AL449266-8|CAI14360.1| 213|Homo sapiens G-protein signalling
modulator 2 (AGS3-like, C. elegans) protein.
Length = 213
Score = 30.3 bits (65), Expect = 4.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 137 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 232
+ Q + +YLHDY+ Y++H LT + +G
Sbjct: 65 YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 96
>Y17739-1|CAB50769.1| 368|Homo sapiens hepatocyte nuclear factor 6
protein.
Length = 368
Score = 29.9 bits (64), Expect = 6.1
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Frame = +2
Query: 191 HYYYHHLTYNKWLGGDVVPLLKERRGEWYWFVHKQLVTRYYMERLSNGFGEIGELS---- 358
H+++HH +++ L G+V R E L T Y+ + G + LS
Sbjct: 129 HHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYTPYHKDVAGMG-QSLSPLSSSGL 187
Query: 359 GNVVNEGYNFGYMYHNGIPYP----VRPNHFHLDHPEYLG 466
G++ N + H G P + PN F HP LG
Sbjct: 188 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFETHHPAMLG 227
>U96173-1|AAD00826.1| 465|Homo sapiens hepatocyte nuclear factor-6
alpha protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.1
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Frame = +2
Query: 191 HYYYHHLTYNKWLGGDVVPLLKERRGEWYWFVHKQLVTRYYMERLSNGFGEIGELS---- 358
H+++HH +++ L G+V R E L T Y+ + G + LS
Sbjct: 129 HHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYTPYHKDVAGMG-QSLSPLSSSGL 187
Query: 359 GNVVNEGYNFGYMYHNGIPYP----VRPNHFHLDHPEYLG 466
G++ N + H G P + PN F HP LG
Sbjct: 188 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFEAHHPAMLG 227
>AF035581-1|AAD02033.1| 465|Homo sapiens hepatocyte nuclear factor
6 protein.
Length = 465
Score = 29.9 bits (64), Expect = 6.1
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Frame = +2
Query: 191 HYYYHHLTYNKWLGGDVVPLLKERRGEWYWFVHKQLVTRYYMERLSNGFGEIGELS---- 358
H+++HH +++ L G+V R E L T Y+ + G + LS
Sbjct: 129 HHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYTPYHKDVAGMG-QSLSPLSSSGL 187
Query: 359 GNVVNEGYNFGYMYHNGIPYP----VRPNHFHLDHPEYLG 466
G++ N + H G P + PN F HP LG
Sbjct: 188 GSIHNSQQGLPHYAHPGAAMPTDKMLTPNGFEAHHPAMLG 227
>BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocyte
homolog 1, lipid desaturase (Drosophila) protein.
Length = 323
Score = 29.5 bits (63), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 GIPYPVRPNHFHLDHPEYLG 466
GIPY + +H+DH YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136
>AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene 15
protein protein.
Length = 323
Score = 29.5 bits (63), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 GIPYPVRPNHFHLDHPEYLG 466
GIPY + +H+DH YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136
>AY044164-1|AAK94675.1| 1244|Homo sapiens lymphocyte alpha-kinase
protein.
Length = 1244
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 194 YYYHHLTYNKWLGGDVVPLLKERRGEWYWF--VHKQLVTRYYM 316
++ HHL + LG V KE++G W+ F V +Q+ ++Y+
Sbjct: 1050 FWVHHLHQEEILGRYVGKDYKEQKGLWHHFTDVERQMTAQHYV 1092
>AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4
desaturase protein DES1 protein.
Length = 323
Score = 29.5 bits (63), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 GIPYPVRPNHFHLDHPEYLG 466
GIPY + +H+DH YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136
>AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein.
Length = 323
Score = 29.5 bits (63), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 GIPYPVRPNHFHLDHPEYLG 466
GIPY + +H+DH YLG
Sbjct: 117 GIPYSISFKRYHMDHHRYLG 136
>AB075877-1|BAD38659.1| 227|Homo sapiens lymphocyte alpha-kinase
protein.
Length = 227
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 194 YYYHHLTYNKWLGGDVVPLLKERRGEWYWF--VHKQLVTRYYM 316
++ HHL + LG V KE++G W+ F V +Q+ ++Y+
Sbjct: 33 FWVHHLHQEEILGRYVGKDYKEQKGLWHHFTDVERQMTAQHYV 75
>AB040960-1|BAA96051.1| 801|Homo sapiens KIAA1527 protein protein.
Length = 801
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 194 YYYHHLTYNKWLGGDVVPLLKERRGEWYWF--VHKQLVTRYYM 316
++ HHL + LG V KE++G W+ F V +Q+ ++Y+
Sbjct: 607 FWVHHLHQEEILGRYVGKDYKEQKGLWHHFTDVERQMTAQHYV 649
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,994,954
Number of Sequences: 237096
Number of extensions: 1657908
Number of successful extensions: 7128
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7124
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -