Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P22
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 56 2e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 50 2e-06
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 48 7e-06
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 42 3e-04
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.006
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 34 0.072
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 33 0.13
At1g68940.1 68414.m07891 armadillo/beta-catenin repeat protein-r... 33 0.22
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.29
At1g23270.1 68414.m02911 hypothetical protein 31 0.88
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro... 30 1.5
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 2.0
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II... 29 2.7
At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P1... 28 4.7
At3g26920.1 68416.m03368 F-box family protein contains F-box dom... 28 4.7
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 28 4.7
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At1g68670.1 68414.m07846 myb family transcription factor contain... 28 6.2
At1g13540.1 68414.m01587 expressed protein 28 6.2
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At4g15075.1 68417.m02316 hypothetical protein 27 8.2
At3g27220.1 68416.m03403 kelch repeat-containing protein contain... 27 8.2
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 27 8.2
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 187 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 363
TD++ +L THL A ++A++Y++ N A + A T ++++ P ++
Sbjct: 21 TDIDSSLF--THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTL 72
Query: 364 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 525
L++GG + +D + + +P +R +F S + +A YGF G+DL W+ P+ +
Sbjct: 73 LSIGGGNADKDA--FASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE 124
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +1
Query: 187 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 363
TD++ +L THL A + + T ++ + N + T ++R+ P ++
Sbjct: 42 TDIDSSLF--THLFCAFADLNSQTNQVTVSSAN------QPKFSTFTQTVQRRNPSVKTL 93
Query: 364 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 516
L++GG D Y + +P +R +F +S++ +A YGF G+DL W+ P
Sbjct: 94 LSIGGG--IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 142
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/101 (28%), Positives = 52/101 (51%)
Frame = +1
Query: 217 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTED 396
THL A + T +V + ++ +N+ I +K++ P ++ L++GG + D
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGRN--AD 91
Query: 397 PQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 519
+ + +P +R +F SA+ A Y FDG+DL W+ PK
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +1
Query: 208 SFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDD 384
S THL A I TY+++ + N + T ++R+ P ++ L++GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRN------KPKFSTFTQTVRRRNPTVKTLLSIGGDF 98
Query: 385 DTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 516
+ + +P +R F +S++ LA GF G+DL+W+ P
Sbjct: 99 TYNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 217 THLLYKSAGIQADTYKMVSLNENLDIDRAHAN-YRAITN-LKRQFPQLRVFLTVGGDDDT 390
THL A + A+++K+ + +AH + T +K + PQ++ L++GG +
Sbjct: 41 THLFCAFADLDANSHKVF-------VSQAHEFIFSTFTETVKIRNPQVKTLLSIGGKNAN 93
Query: 391 EDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 516
+ + + Q+R F +S + +A GF G+DL+W+ P
Sbjct: 94 NSA--FASMASNHQSRKTFIDSWIFIARSNGFHGLDLAWEYP 133
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 415 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 519
+ S R +F S + +A YGFDG+DL W+ P+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 331 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 510
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 79 VKEKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 136
Query: 511 LP 516
P
Sbjct: 137 YP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 331 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 510
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 71 VKDKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128
Query: 511 LP 516
P
Sbjct: 129 YP 130
>At1g68940.1 68414.m07891 armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein ;
contains Pfam profile PF04564: U-box domain
Length = 1033
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 124 KSSATMTARAISENLQARMLPTDLEPALSFCTHLLYKSAGIQ-ADTYKMVSLNENLDIDR 300
K SA T +SE ++ + PTD P S+ ++++Y + Q D + S + ++ R
Sbjct: 109 KISAKHTPDIVSEQMEEDLYPTD--PEFSYESYMMYSESQSQMTDIPDIPSKSTDVSRQR 166
Query: 301 AHANYRAITNLKRQFPQL 354
H N+ +L + P +
Sbjct: 167 KHGNHSESQSLVTEIPDI 184
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 415 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 516
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At1g23270.1 68414.m02911 hypothetical protein
Length = 180
Score = 30.7 bits (66), Expect = 0.88
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Frame = -2
Query: 548 ILERIFFGFLFGNCQDRSIPSKPYCSARRRAEL-VKAVRACGDSNKRLYFCGSSVSSSPP 372
+LE++ G D ++P+ P RR L V + S K+L +S++S P
Sbjct: 25 VLEQVAKINCSGFTDDTALPTNPETRLRRLKSLPVSRTDSVSSSPKKLLSHSNSMASHPE 84
Query: 371 TVKNTRN*GNCLFKFVIAR*LACARSMSKFSLSETILYVSAWMPADLYSRWVQNERAGSK 192
K R + + F I +C S + ET ++ + SR E +GSK
Sbjct: 85 --KKYRGNVSSVSSFSIQVGKSCPLDSS---VEETQIFSKTKRNQSVKSRGGLGESSGSK 139
Query: 191 SVGSIRAXRFS 159
+GS + RFS
Sbjct: 140 RIGS-SSSRFS 149
>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
protein
Length = 420
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 481 GFDGIDLSWQLPKRKPKKIRSSI 549
GF GI ++W L K PK++R S+
Sbjct: 30 GFAGISVAWHLLKESPKELRLSV 52
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 209 RSAPICCTNLPASKLTHIKWFHSM 280
RS PIC T P+S +H KW H +
Sbjct: 13 RSCPICATPFPSSSSSH-KWTHQV 35
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 151 AISENLQARMLPTDLEPALSFCTHLLYKSAG 243
A S + PTD P+LSFC +Y S G
Sbjct: 310 ATSRQMPHPTTPTDPNPSLSFCPSNIYSSTG 340
>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
(IP5PII) nearly identical to inositol polyphosphate
5-phosphatase II [Arabidopsis thaliana] GI:10444263
isoform contains an AT-acceptor splice site at intron 6
Length = 613
Score = 29.1 bits (62), Expect = 2.7
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Frame = +1
Query: 130 SATMTARAISENLQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 309
S + A+ + A P + A S +H++ ++ + AD ++ NE +D A
Sbjct: 191 SPSCNNNALHRSHSAPSSPILAQEANSIISHVMVEN--LVADHSLDLATNEFIDAATALP 248
Query: 310 NYRAITNLKRQFPQLRVFLT---VGGDDDTEDPQKYNLLL-----ESPQARTAFTNSALL 465
+ N +P+L + VG + N L E+P + F + A
Sbjct: 249 SLEPQRNPNMDWPELALDSNPQIVGSEGKLRRVFSSNATLGFKLPENPSGASRFASEARQ 308
Query: 466 LAEQYGFDGIDLSW-QLPKRKPKKIRSSIG 552
L F+ ++LSW + + KIR+S G
Sbjct: 309 LKRSRSFETLNLSWNDIKEEDGDKIRNSYG 338
>At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P14714
Phytochrome C {Arabidopsis thaliana}
Length = 1111
Score = 28.3 bits (60), Expect = 4.7
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = -2
Query: 449 VKAVRACGDSNKRLYFCGSSVSSSPPTVKNTRN*GNCLFKFVIAR*LACARSMSKFSLSE 270
V ++R GD+ + ++ SS R G C+ VIAR A + M + L
Sbjct: 987 VSSMRLYGDNLRLQQILSETLLSSIRFTPALR--GLCVSFKVIARIEAIGKRMKRVELEF 1044
Query: 269 TILYVSAWMPADLYSRWVQNERAGSKSVG 183
I++ + +P DL Q R G+ G
Sbjct: 1045 RIIHPAPGLPEDLVREMFQPLRKGTSREG 1073
>At3g26920.1 68416.m03368 F-box family protein contains F-box domain
Pfam:PF00646
Length = 565
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 572 LMLCQKDPILERIFFGFLFGNCQ 504
L+L K P LE + GF FG C+
Sbjct: 336 LLLSNKAPFLESLHLGFRFGECR 358
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 173 HVCCLRTWSLLFRSAPICCTNLPASKLTH 259
HV C+ TW L + P+C +NL + +H
Sbjct: 150 HVECIDTWLLSHSTCPLCRSNLLSGFSSH 178
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 223 LLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQ 402
LL+ +A A Y + + L ID A +++ Q P LR + VG +
Sbjct: 547 LLFSTASCSARLYTGTPI-QLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMV 605
Query: 403 KYNLLLESPQARTAFTNSALLLAEQY 480
+ + LE+ R+ F ALL ++Y
Sbjct: 606 ESQIALEAGFGRSLFERLALLGHKKY 631
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 173 HVCCLRTWSLLFRSAPICCTNLPASKLT 256
H C+ W + S P+C LPA LT
Sbjct: 224 HPDCILPWLAIRNSCPVCRHELPAEDLT 251
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +1
Query: 40 KTPWSPSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLQARMLPTDLEPALSFCT 219
K+ W S W L + + KAK + Q R+L TDL+PA+ +
Sbjct: 114 KSDWLRSVQLWNHSPDLNPKEERVAKKAKVVEVKPKSGAFQPFQKRVLETDLQPAVKVAS 173
Query: 220 HL 225
+
Sbjct: 174 SM 175
>At1g13540.1 68414.m01587 expressed protein
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 349 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 447
+L V +GGDD T DP + +L+ P + +
Sbjct: 65 KLAVTFNIGGDDSTRDPVVFIPVLDKPLSSNCY 97
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 173 HVCCLRTWSLLFRSAPICCTNLPAS 247
HV C+ W L S P+C LP+S
Sbjct: 282 HVRCIVPWLELHSSCPVCRFELPSS 306
>At4g15075.1 68417.m02316 hypothetical protein
Length = 168
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 164 IXKHVCCLRTWSLLFRSAP 220
I ++ CCL+T ++LF+S P
Sbjct: 125 ILRNACCLKTATILFKSTP 143
>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
Pfam PF01344: Kelch motif (4 repeats); contains Prosite
PS00334: Myb DNA-binding domain repeat signature 2;
similar to Male enhanced Antigen-1 (peas) (GI:20513270)
[Mus musculus]
Length = 426
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 448 TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWH 564
T +L+ E + F L+W + R P ++++++ FW+
Sbjct: 355 TKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWN 393
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 173 HVCCLRTWSLLFRSAPIC 226
H+CCL W L S P+C
Sbjct: 162 HLCCLDAWLKLNGSCPVC 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,905,319
Number of Sequences: 28952
Number of extensions: 248689
Number of successful extensions: 818
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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