Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P21
         (295 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q61FE1 Cluster: Putative uncharacterized protein CBG116...    31   3.7  

>UniRef50_Q61FE1 Cluster: Putative uncharacterized protein CBG11671;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG11671 - Caenorhabditis
           briggsae
          Length = 302

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 83  KNQMIYYCVLFLAFSVISR--NHNIMCLRL*YFIFIDVK 193
           ++ M+Y+C   + FS+I      NI   +  YF+F+DVK
Sbjct: 5   RHLMVYFCCCSIVFSIIDLCVQPNIQTYKSAYFMFVDVK 43


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,680,445
Number of Sequences: 1657284
Number of extensions: 3342797
Number of successful extensions: 5733
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5732
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 9929495642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)