Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P19
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 1e-36
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 120 6e-28
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 86 1e-17
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 76 2e-14
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 72 3e-13
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 48 4e-06
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 45 4e-05
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 42 4e-04
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 38 0.005
SB_47411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.4
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 27 9.5
SB_5913| Best HMM Match : RVT_1 (HMM E-Value=1.2) 27 9.5
SB_13871| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 27 9.5
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 149 bits (361), Expect = 1e-36
Identities = 72/153 (47%), Positives = 92/153 (60%)
Frame = +3
Query: 66 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 245
+LFINNE+VD S K FPTINP I ++EG F S WR +D
Sbjct: 331 ELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEAFKLGSAWRTMD 390
Query: 246 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 425
AS RG LL+KLA L++RD YLA LET+D+GK + ++ ++ RYYAG ADK+ G
Sbjct: 391 ASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDMQSSANCFRYYAGWADKVTG 450
Query: 426 NTIPADGEVLTFTLKEPVGVCGQILPWNYPIPM 524
TIPADG +T EPVG+ G I PWN+P+ M
Sbjct: 451 KTIPADGPYFVYTRHEPVGLVGAITPWNFPLNM 483
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 120 bits (290), Expect = 6e-28
Identities = 57/100 (57%), Positives = 68/100 (68%)
Frame = +3
Query: 225 SEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAG 404
S WR +DAS RG L+KLA L ERDA YLA LE+ D GK + +A+ +V G RYYAG
Sbjct: 1254 SVWRTMDASARGHFLYKLADLCERDADYLARLESYDGGKVINEAKIDVQGMIGCFRYYAG 1313
Query: 405 KADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPM 524
ADK+ G TIPADG T+T EPVGV G I PWN+P+ M
Sbjct: 1314 WADKVTGKTIPADGPFFTYTRHEPVGVVGAITPWNFPLLM 1353
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 86.2 bits (204), Expect = 1e-17
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Frame = +3
Query: 57 KYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWR 236
K+ + I ++W DA +T +NP VI +V F S W
Sbjct: 42 KHHQCLIGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDD-SPWS 100
Query: 237 LLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGKAD 413
+ +R LL+ A L+E++A LAE+E++DNGK AE ++ A +RY AG A
Sbjct: 101 RIKPVERQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFAT 160
Query: 414 KILGNTIPA------DGEVLTFTLKEPVGVCGQILPWNYPI 518
KI G T+ D + +T +E VGV G I+ WN+P+
Sbjct: 161 KIEGRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPL 201
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Frame = +3
Query: 246 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 425
A +R ++L K L+ + +A++ TL++GKP+ +A EVL+A+ + +++ +A ++ G
Sbjct: 4 AKERSIILRKWYDLILENIDDIAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVYG 63
Query: 426 NTIPAD--GEVLTFTLKEPVGVCGQILPWNYPIPM 524
+ IP++ G+ + T KEPVGVC I PWN+PI M
Sbjct: 64 DIIPSNNPGQKVLIT-KEPVGVCASITPWNFPIAM 97
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/99 (34%), Positives = 55/99 (55%)
Frame = +3
Query: 222 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 401
+ W +L S+RG +L + L+ + + +A++E DNGKP +A +V + ++ YYA
Sbjct: 326 FKTWSVLSGSERGRILGDASRLVRKRREDIAKVEVHDNGKPFHEALWDVDNVADVLEYYA 385
Query: 402 GKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 518
G A + G + +T +EP+GV G I WNYPI
Sbjct: 386 GVAPTLSGQHVQLPNGSFAYTRREPLGVVGGIGAWNYPI 424
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 48.4 bits (110), Expect = 4e-06
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 1/149 (0%)
Frame = +3
Query: 72 FINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDAS 251
+I EWV+ +K + I+P D S ++ R EW+
Sbjct: 9 YIAGEWVEG-NKGSVANISPADISDVIGHYAQADKAQTEAAIAAAAAGQR--EWQKSGLE 65
Query: 252 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNT 431
QR +L + + L + + GK + + E + YYA + + +G T
Sbjct: 66 QRYSVLMAIGDELIARKDELGAILAREEGKTLAEGVGETYRSGQFFHYYAAEVLRQMGET 125
Query: 432 IPADGEVLTF-TLKEPVGVCGQILPWNYP 515
+ + T +EPVGV G I PWN+P
Sbjct: 126 AESVRPGIEIETRREPVGVVGIITPWNFP 154
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 47.2 bits (107), Expect = 8e-06
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +3
Query: 222 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYY 398
+ W L R L+ +A +++ A+ +A LE++DNGK V++ ++ + + ++
Sbjct: 692 FQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGKSVRETRDCDIPNVARHLYHH 751
Query: 399 AGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 518
AG A + D E+ + +PVGV G I+PWN+P+
Sbjct: 752 AGWAQLM-------DTEMQGW---KPVGVVGGIVPWNFPL 781
Score = 35.1 bits (77), Expect = 0.036
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
Frame = +3
Query: 117 PTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLME- 293
P +NP E VI QVA+G S W A R +++ LA +E
Sbjct: 1166 PILNPSGE-VIAQVADGNRKDIREAVEAAHKAA---SGWGKRAAHNRAQIVYYLAENLEM 1221
Query: 294 RDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGN--------TIPADGE 449
R A+ A + + G+ + + + EV + + YY ADK GN T P +
Sbjct: 1222 RRAEVAARISDM-TGQSLDECKAEVDASIQRLFYYGAYADKFGGNRPVFSDKDTKPEETP 1280
Query: 450 VLTFTLK--EPVGVCGQILP 503
T+K EPVGV G P
Sbjct: 1281 FYGATIKIHEPVGVIGIACP 1300
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 318 LETLDNGKPVKQA-EQEVLWASGIVRYYAGKADKILGNTIP---ADGEVLT 458
LETLDNGKP + ++ + RYYAG ADKI G TIP DGE +T
Sbjct: 33 LETLDNGKPYNDSFNVDLEFTIKCYRYYAGWADKIHGKTIPLGKVDGEQMT 83
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +3
Query: 222 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYY 398
+ W + + R L KLA L+E + A+ E+ D GK V A ++ +R +
Sbjct: 59 FKSWSVSSPAYRAERLRKLADLIEDRLEEFAQAESRDQGKTVNFARNVDIPRCCLNLRMF 118
Query: 399 AGKADKILGNTIPAD----GEVLTFTLKEPVGVCGQILPWNYPI 518
A ++G+ A+ V+ ++L+ P GV G I PWN P+
Sbjct: 119 ASAI--MVGSNSRANFLESQAVVNYSLRSPKGVAGLISPWNLPL 160
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3
Query: 66 KLFINNEWVDAVSKKTFPTINPQDESVIVQVA 161
+LFIN E+VD+ KTF TINP D +V+ QV+
Sbjct: 710 QLFINGEFVDSHHGKTFNTINPTDGTVLAQVS 741
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 285 LMERDAKYLAELETLDNGKPVKQAEQEVLWASGI--VRYYAGKADKILGNTIPADGEVLT 458
L+E+ ++ ++ ETLD G + +A +A+ + +R A I+G + A+G L
Sbjct: 87 LLEKRSEDFSKAETLDTGTVISRANNNKEFANEVLNIRVLVDHALSIMGES-TAEGGTLC 145
Query: 459 FTLKEPVGVCGQILPWNYPIP 521
++++ +GV I W+ +P
Sbjct: 146 YSIRHSLGVVAIITSWSQALP 166
>SB_47411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 215 PSLLRMASPGCFTKRPTALQTGH-PHGERRKIFSRTRNTGQRKTSEASRTRSLVG 376
PSL++ S TK+ T +T H E + F+R G R+ + ++T+ L G
Sbjct: 303 PSLMQRPSKKTQTKKGTGDETEDCRHAETMRDFTREYGRGVRQANVRAKTKELTG 357
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 240 LDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVL 371
LDA G++ F+LA E + ++E D G P ++ V+
Sbjct: 2253 LDAGVNGVVKFRLAEQTELGGNRVVKVEAYDQGSPSLSSQVSVI 2296
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 490 PQTPTGSFKVNVRTSPSAGIVFPKILSAFP 401
P+ PT F V+++ SPS +V + S++P
Sbjct: 248 PRIPTSLFLVSLQASPSPSLVHLQASSSYP 277
>SB_5913| Best HMM Match : RVT_1 (HMM E-Value=1.2)
Length = 628
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 223 TPNGVSWMLHKEAYCSSNW 279
T N VSW+L ++ YC N+
Sbjct: 330 TTNAVSWILRQQGYCVFNY 348
>SB_13871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 235 VSWMLHKEAYCSSNWPPSWRETQNI*QNSKH 327
+SW+ HKE P +W T++ QN H
Sbjct: 2 ISWVKHKERKRIKKRPLAWDRTRSEEQNGNH 32
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +3
Query: 252 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNT 431
+RG ++ ++ + L +L +L+ GK + E+ + Y G + G
Sbjct: 73 KRGEVVRQIGHALREKLTPLGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRMFDGKV 132
Query: 432 IPAD--GEVLTFTLKEPVGVCGQILPWNYPI 518
P++ G L PVG G I +N+P+
Sbjct: 133 FPSERPGHAL-LEQWNPVGTVGVITAFNFPV 162
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 48 VDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAE 164
VD++ TK+ E+ D V+ T PT P+D+ + VA+
Sbjct: 1131 VDVRRTKM----EYTDDVATLTIPTTRPEDKGMYKCVAK 1165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,692,318
Number of Sequences: 59808
Number of extensions: 305231
Number of successful extensions: 860
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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