Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P17
         (310 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   1.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   1.9  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   1.9  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   2.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   2.6  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   2.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   3.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   3.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   7.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   7.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 149 YFDKCLLEGFRHYYTVTL 96
           Y ++CLLE  R Y  V L
Sbjct: 399 YLERCLLETLRMYPPVPL 416


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 139 NASWKASDTTTLSPLTMFGAGSLNIFETPNLGIKGLRSNLL 17
           N+ W AS    L+P +  G   L+  E     ++ L  N L
Sbjct: 127 NSVWGASRFLELAPDSFLGLRELHTLEIVESNVQALPVNSL 167


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 22 NWTLNL*CPSLEFRKYSTSLHQTSS 96
          NW L + C S+  +  ++++HQ  S
Sbjct: 3  NWLLLIVCLSIACQDVTSAIHQRKS 27


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 167 CGSFFIYFDKCLL 129
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 167 CGSFFIYFDKCLL 129
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 167 CGSFFIYFDKCLL 129
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 179 ESAGCGSFFIYFDKC 135
           ES      + YFDKC
Sbjct: 454 ESVNIDKLYTYFDKC 468


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 179 ESAGCGSFFIYFDKC 135
           ES      + YFDKC
Sbjct: 454 ESVNIDKLYTYFDKC 468


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 92  DVWCRLVEYFR 60
           DV CR++ +FR
Sbjct: 108 DVMCRIMAFFR 118


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 308 GISTSKDYLIFI*NEISER 252
           G   SKD L+F+ N  ++R
Sbjct: 294 GFLPSKDSLVFVDNHDTQR 312


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,897
Number of Sequences: 438
Number of extensions: 1434
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)