Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P14
(496 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 28 0.67
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 0.89
SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 27 1.6
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 3.6
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 4.7
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 6.3
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 25 6.3
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 8.3
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 25 8.3
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 8.3
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 28.3 bits (60), Expect = 0.67
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 480 ICPFCRDCTKVFS 442
ICP C DCT +FS
Sbjct: 200 ICPHCADCTNIFS 212
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 0.89
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 204 LSIAVAKYITISTNN*QHVITSSVLQTAWVPYLNSLG 314
LSI+ AK TI + + + S++L T+W+ +LNS+G
Sbjct: 3546 LSISSAKLSTICRSVLKASVNSALL-TSWICFLNSIG 3581
>SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 251
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 344 LMTSYYFPFAQRPDNYNLHSVKNYEAIRFLD 436
L+ SYY PF DN ++ V YEA + +
Sbjct: 20 LLNSYYGPFYDDGDNTGVNVVDLYEAFKVFE 50
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 3.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 290 GSIPEFSWYSPIKTGYYPLMTSYYFPFAQRP 382
G P+ +Y P + YYP +Y P +P
Sbjct: 107 GGYPQQPYYYPNQPNYYPAQPAYAQPVYAQP 137
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 4.7
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 233 NFYQQLTTRYYFERLTNGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRPDNYNLHS 403
NFY + YF T G+ S+P F + YP S Y P P ++ S
Sbjct: 126 NFYPPIQNSTYFINATGGIDSMPYFG-LNNAPGNIYPF--SMYKPLEADPQYLSVPS 179
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 6.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 164 HLPFWWSSERYGNLKHRRGEI-YYNFYQQLTTRYYFERLTNGLGSIPEFSWYSP 322
H FWWS + NL E+ NF L FE N + EFS SP
Sbjct: 118 HQKFWWSLRKKRNLPKENSELDLSNFQDDLD----FE---NSISQKNEFSQKSP 164
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 6.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -1
Query: 382 RPLSEWEIV*SHQGIVTSLNR-----RVPREFRYGTQAVCKTLEVITC 254
RP + ++V SH+ I+++L + RVP YG KT ++ C
Sbjct: 30 RPANLEDVV-SHKDIISTLEKFISSNRVPHMLFYGPPGTGKTSTILAC 76
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 8.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 89 NNEEQRLTYLTEDIGFNSYYYYFHSHL 169
+ + Q++ Y+ ++ NSY Y HSH+
Sbjct: 313 SRKTQKIHYINDNDPSNSYSSYQHSHV 339
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 24.6 bits (51), Expect = 8.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 22 LWNCKRGRAVCVLRQLFQH 78
+WN + G +C R+ +QH
Sbjct: 202 IWNSETGEKICEFRRGYQH 220
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 24.6 bits (51), Expect = 8.3
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 47 QYVYYANYSNTFLYNNEEQRLT--YLTEDIGFNSYYYYFHSHLPFWWSSERY 196
Q ++ SN + N L+ Y+T D GF S Y Y S + S E +
Sbjct: 265 QNTFFNGKSNPTIDPNSSSLLSEKYITLDKGFPSKYIYSRSLFEYQLSDEDF 316
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,073,399
Number of Sequences: 5004
Number of extensions: 42235
Number of successful extensions: 141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 194131776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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