Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P11
(613 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 182 3e-47
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 63 4e-11
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 46 6e-06
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.025
SPAC15E1.06 |vps29||retromer complex subunit Vps29|Schizosacchar... 29 0.53
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 29 0.70
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 0.93
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 1.6
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 27 2.8
SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|c... 26 3.7
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 26 4.9
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 4.9
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 25 8.6
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 25 8.6
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 182 bits (444), Expect = 3e-47
Identities = 95/131 (72%), Positives = 106/131 (80%), Gaps = 3/131 (2%)
Frame = +3
Query: 210 QFED--NLPPILNALEVQ-NRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGS 380
QFED +LP ILNALEV+ + RLVLEVAQH+GENTVRTIAMDGTEGLVRG V D+GS
Sbjct: 68 QFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGS 127
Query: 381 PIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 560
PI IPVG TLGRI+NVIGEP+DERGPI K + IHA+AP F + S EIL TGIKVV
Sbjct: 128 PISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVV 187
Query: 561 DLLAPYAKGGK 593
DLLAPYA+GGK
Sbjct: 188 DLLAPYARGGK 198
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 62.9 bits (146), Expect = 4e-11
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +3
Query: 285 VAQHLGENTVRTIAMDGTEGLVR-GQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGP 461
+A +L +TV + G + LVR G+ V + + +PVG LGR+++ +G PID +GP
Sbjct: 90 MALNLEADTVGCVLF-GNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGP 148
Query: 462 IPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKD 596
I T + + +AP + + E + TG+K +D + P +G ++
Sbjct: 149 IKTTERRRVQLKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQRE 193
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 45.6 bits (103), Expect = 6e-06
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 276 VLEVAQHLGENTVRTIAMDGTEGL-VRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 452
VLEVA H V +GT G+ VR + +G +RIPV + LGR+ N G PID+
Sbjct: 63 VLEVAGHKAIVQV----FEGTSGVDVRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPIDK 118
Query: 453 RGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
+ + I+ +E++ TGI +D L A+G K
Sbjct: 119 GPNLLAEDYLDINGSPINPYARIYPEEMIQTGISSIDGLNSIARGQK 165
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 33.5 bits (73), Expect = 0.025
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -1
Query: 604 TDRSLPPLA*GASKSTTL-MPVTRISCCTDMSTNSGASAWMAAVLSVGIGPRSSIGSPMT 428
T +PP + ++ + + +P T SC T S +G S+ ++ ++ + P S+ S +
Sbjct: 203 TSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTST--SSTS 260
Query: 427 LMIRPRVSAPTGIRMGE-PESCTGCPRTKPSVPSMAMVRTVFSPKCCATSNT 275
+ I P ++ T P + T C T S+P T +P TS +
Sbjct: 261 IPIPPTSTSSTDTNSSPLPTTSTSC-TTSTSIPPTGNSTTPVTPTVPPTSTS 311
>SPAC15E1.06 |vps29||retromer complex subunit
Vps29|Schizosaccharomyces pombe|chr 1|||Manual
Length = 187
Score = 29.1 bits (62), Expect = 0.53
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 536 DLLLYGHVYKFGSFSVDGSCFISRNRAAFVNRLTDDIDD 420
D+LL+G +KF ++ +DG F++ A ++ DD
Sbjct: 109 DILLFGGTHKFAAYELDGCFFVNPGSATGAPNVSAVEDD 147
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 28.7 bits (61), Expect = 0.70
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -3
Query: 176 LTLGFACSFCRIVPLVDGRHSCNLATFCKGFFRNCFSG*EAASNPTYCTQHFSIIS 9
L L C + + + L+ G H T GF+ C +A+ YC + F +S
Sbjct: 95 LLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWRYCCEIFDYLS 150
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 28.3 bits (60), Expect = 0.93
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 460 GPRSSIGSPMTLMIRPRVSA-PTGIRMGEPESCTGCPRTKPSVPSM 326
G R++ G+P + R+++ PT I PES K S PS+
Sbjct: 154 GKRTAPGNPWAIRSAERLASNPTSIGTSSPESIDNNSNNKKSAPSL 199
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 244 LSRYKIAPLVSYWRSRSTWVKIRSEPLPWTVP 339
L+RY I+P +S S ++I S +PW P
Sbjct: 219 LNRYDISPAAFILKSGSPSLQIHSVEIPWVEP 250
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 336 TEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 452
T GL G PV +G P+ + +G I + I P+ +
Sbjct: 77 TSGLTVGDPVQRTGKPLSVELGPGLAETIYDGIQRPLKQ 115
>SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 113
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 317 NHCHGR-YRGFSARTTRT*LWFTHPYPRRSRDSGPYHQCH 433
NH + YR F+ R LW+ +PY + +G YH +
Sbjct: 75 NHSYSAFYRPFTKRENG--LWYANPYYMQHGPNGNYHHVY 112
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 112 AILPHSVKVFSATVLAAKKPLPTRLTAPNIF 20
A++ K+FSA V++A +P L A N+F
Sbjct: 1070 ALISGFFKIFSAAVVSATLLIPFALWAKNVF 1100
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -1
Query: 466 GIGPRSSIGSPMTLMIRPRVSAPTGIRMGEPESCTGCPRTKPSVPSMA 323
G G ++S+GS I R+ PT MG S G T P+ A
Sbjct: 487 GHGSQTSLGSIKRKSIMERMGRPTSPFMGSSFSNMGSRSTSPTKEGFA 534
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 261 RSPRLVLEVAQHLGENTVRTIAMD 332
R+P LVL+ A LGEN + D
Sbjct: 362 RNPSLVLDSANQLGENVAWPVQYD 385
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 312 VRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPID 449
++ + DG G+ + + D+ P P E LGR+I V PID
Sbjct: 1 MKAVIADGQNGV---EVISDAPKPT--PEKGEFLGRVIRVAFNPID 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,693,360
Number of Sequences: 5004
Number of extensions: 57979
Number of successful extensions: 170
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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