Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P11
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 221 2e-58
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 68 5e-12
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 68 5e-12
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 48 5e-06
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 48 7e-06
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 45 4e-05
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.6
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 28 4.6
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 28 6.0
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 28 6.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.0
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 27 8.0
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 221 bits (541), Expect = 2e-58
Identities = 105/128 (82%), Positives = 116/128 (90%)
Frame = +3
Query: 210 QFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSPIR 389
QF++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G PI+
Sbjct: 83 QFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIK 142
Query: 390 IPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 569
IPVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+QEILVTGIKVVDLL
Sbjct: 143 IPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLL 202
Query: 570 APYAKGGK 593
APYAKGGK
Sbjct: 203 APYAKGGK 210
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/104 (29%), Positives = 57/104 (54%)
Frame = +3
Query: 285 VAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 464
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122
Query: 465 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKD 596
+ + + +AP + +E +VTG+K VD L P +G ++
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRE 166
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/104 (29%), Positives = 57/104 (54%)
Frame = +3
Query: 285 VAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 464
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149
Query: 465 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKD 596
+ + + +AP + +E +VTG+K VD L P +G ++
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRE 193
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 297 LGENTVRTIAMDGTEGLVRGQPVHD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 473
+ +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+ +
Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130
Query: 474 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
I+ + +E++ TGI +D++ A+G K
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 170
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 429 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKD 596
V+G PID +GPI + + + +AP + +E +VTG+K VD L P +G ++
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRE 158
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 330 DGTEGL-VRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 506
+GT G+ + +G R PV + LGRI N G+PID+ P+ + I+ +
Sbjct: 94 EGTTGVDAKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPIN 153
Query: 507 FVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
+ +E++ TGI +D++ A+G K
Sbjct: 154 PFNRIYPEEMIQTGISAIDVMNSIARGQK 182
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 336 TEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 452
T G+ G PV +G P+ + +G +G I + I P+ +
Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 24 MLGAVSRVGSGFLAAKTVAEKTFTECGKIAAVSSVNKRD 140
++GA+ ++ +G+L+ V K ++ + AVS + RD
Sbjct: 599 VIGAIKKINTGYLSGARVVMKDLSDFFRTTAVSKMEFRD 637
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 415 PRVSAPTGIRMGEPESC 365
PR S+P G RMG P SC
Sbjct: 138 PRASSPGGDRMGSPGSC 154
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 330 DGTEGLVRGQPVH-DSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 506
D +G + G+P+ D G ++ P G E + ++ N GEP+DE A I + E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209
Query: 507 FVDMSV 524
+++V
Sbjct: 210 HAELTV 215
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 281 GGRAALG*KYGPNHCHGRYRGFSART 358
GGR G ++GP HC GR+ +R+
Sbjct: 348 GGRHGHGGRHGPPHCPGRHGRHGSRS 373
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 500 SFSVDGSCFISRNRAAFVNRLTDDID-DTA 414
SFS D S IS ++ F+ RL DDI+ DT+
Sbjct: 565 SFSADLSVLISSSKMPFLARLFDDIEYDTS 594
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,923
Number of Sequences: 27780
Number of extensions: 350091
Number of successful extensions: 1011
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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