Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P11
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.4  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    22   5.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.4  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 137 PLVDGRHSCNLATFCKGFFRNCFSG*EAASNPTYC 33
           P V    S + +T C G    CF+G    S+ + C
Sbjct: 278 PPVKQHRSSSASTTCSGHTVRCFTGGPRKSHESQC 312


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -2

Query: 324 QWFGPYFHPSAARPPIRDEGSDFVP--REHL 238
           QW    + PSA RP      +D +P  +EH+
Sbjct: 511 QWGILVYEPSACRPRHEIRSTDVIPGTQEHV 541


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 430 TLMIRPRVSAPTGIRMGEPESCTGCP 353
           T + RP  S  T +RMG    C   P
Sbjct: 271 TSLFRPLSSEATDLRMGVASFCKAFP 296


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 175 RWLQLSVLWLMYS 213
           +WLQ+  LWL +S
Sbjct: 653 KWLQVLALWLNHS 665


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 94  QNVARLQLCLPSTRGTMRQKLQAKPKVRW 180
           + +  + + LPS  G M Q    KPK  W
Sbjct: 19  EQMMNILMFLPSWDGKMPQPCILKPKPLW 47


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 261 RSPRLVLEVAQHLGENTVRTIAMDGTE 341
           RSP  + ++AQ+ G N +   A+D T+
Sbjct: 897 RSPDTLRKIAQNRGTNPLAPDAVDLTQ 923


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 6/65 (9%)
 Frame = -2

Query: 348 LNPRYRPWQWFGPYFHPSAARPPIRDEGSDFV------PREHLEWEAGCLRTVHQPQHR* 187
           L P Y P Q     +HP     P    G+  +      P  H   +   L+ +H  Q   
Sbjct: 312 LPPSYHPHQHHPSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPT 371

Query: 186 LQPPY 172
           L   Y
Sbjct: 372 LSESY 376


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,055
Number of Sequences: 438
Number of extensions: 4269
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)