Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P11
(613 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 175 1e-44
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 175 1e-44
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 175 1e-44
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 62 3e-10
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 49 3e-06
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 49 3e-06
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 49 3e-06
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 49 3e-06
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 49 3e-06
At3g54040.1 68416.m05975 photoassimilate-responsive protein-rela... 31 0.60
At3g54510.1 68416.m06032 early-responsive to dehydration protein... 29 1.8
At4g10510.1 68417.m01723 subtilase family protein contains simil... 29 3.2
At5g46200.1 68418.m05684 expressed protein contains similarity t... 28 4.2
At3g62640.1 68416.m07036 expressed protein 28 4.2
At3g29630.1 68416.m03726 glycosyltransferase family protein cont... 28 5.6
At2g41590.1 68415.m05139 expressed protein similar to zinc finge... 28 5.6
At1g28380.1 68414.m03487 expressed protein 28 5.6
At4g32500.1 68417.m04626 potassium channel protein, putative sim... 27 9.8
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 175 bits (427), Expect = 1e-44
Identities = 85/130 (65%), Positives = 103/130 (79%), Gaps = 2/130 (1%)
Frame = +3
Query: 210 QFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSP 383
+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V ++G+P
Sbjct: 97 RFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAP 156
Query: 384 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 563
I +PVG TLGRI+NV+GEPIDERG I T+ IH +AP VD++ QEIL TGIKVVD
Sbjct: 157 ITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVD 216
Query: 564 LLAPYAKGGK 593
LLAPY +GGK
Sbjct: 217 LLAPYQRGGK 226
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase
beta chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 175 bits (427), Expect = 1e-44
Identities = 85/130 (65%), Positives = 103/130 (79%), Gaps = 2/130 (1%)
Frame = +3
Query: 210 QFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSP 383
+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V ++G+P
Sbjct: 100 RFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAP 159
Query: 384 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 563
I +PVG TLGRI+NV+GEPIDERG I T+ IH +AP VD++ QEIL TGIKVVD
Sbjct: 160 ITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVD 219
Query: 564 LLAPYAKGGK 593
LLAPY +GGK
Sbjct: 220 LLAPYQRGGK 229
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 175 bits (427), Expect = 1e-44
Identities = 85/130 (65%), Positives = 103/130 (79%), Gaps = 2/130 (1%)
Frame = +3
Query: 210 QFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSP 383
+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V ++G+P
Sbjct: 97 RFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAP 156
Query: 384 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 563
I +PVG TLGRI+NV+GEPIDERG I T+ IH +AP VD++ QEIL TGIKVVD
Sbjct: 157 ITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVD 216
Query: 564 LLAPYAKGGK 593
LLAPY +GGK
Sbjct: 217 LLAPYQRGGK 226
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/104 (27%), Positives = 52/104 (50%)
Frame = +3
Query: 285 VAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 464
+A +L V + G + G V +GS + +P G LGR+++ +G PID +G +
Sbjct: 334 MALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGAL 393
Query: 465 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKD 596
+ + +AP ++ E + TG+K VD L P +G ++
Sbjct: 394 SDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRE 437
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 300 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 476
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 64 GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 122
Query: 477 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
I + + + +E++ TGI +D++ A+G K
Sbjct: 123 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 161
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 300 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 476
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 64 GEKAVVQV-FEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 122
Query: 477 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
I + + + +E++ TGI +D++ A+G K
Sbjct: 123 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 161
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 300 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 476
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 63 GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121
Query: 477 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
I + + + +E++ TGI +D++ A+G K
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 160
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 300 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 476
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 63 GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121
Query: 477 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
I + + + +E++ TGI +D++ A+G K
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 160
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 300 GENTVRTIAMDGTEGLV-RGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDK 476
GE V + +GT G+ + V +G ++ PV + LGRI N G+PID PI +
Sbjct: 63 GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA 121
Query: 477 TAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGK 593
I + + + +E++ TGI +D++ A+G K
Sbjct: 122 YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 160
>At3g54040.1 68416.m05975 photoassimilate-responsive protein-related
contains weak similarity to mRNA inducible by sucrose
and salicylic acid expressed in sugar-accumulating
tobacco plants (GI:871487) [Nicotiana tabacum]
Length = 183
Score = 31.1 bits (67), Expect = 0.60
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 219 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 350
+NLP + + + R +LE A GE T RT A+D EG+V
Sbjct: 29 ENLPTNMCSFSISASGKRCILETANVAGEFTCRTSAVD-VEGIV 71
>At3g54510.1 68416.m06032 early-responsive to dehydration
protein-related / ERD protein-related low similarity to
ERD4 protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 617
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +3
Query: 414 GRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQ-------EILVTGIKVVDLLA 572
G +++ IGE + IP+ AA+ A+A F+ + EIL G+ + D++
Sbjct: 364 GSLLDEIGEYLTHPRDIPSHLAAAVSAQAEFFMTYILTDGLSGFSLEILQLGLILFDIIR 423
Query: 573 PYAKG-GKDRS 602
Y G GK+R+
Sbjct: 424 SYTYGRGKERT 434
>At4g10510.1 68417.m01723 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 765
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 599 PIFASFSIGCEQIHDFDASHKDLLLYGHVYKFGSFSVDGSCFISRNRAAFVN 444
P+ + + GCE DF++SH + L G Y +F F S F++
Sbjct: 152 PVPSHWKGGCESGEDFNSSHCNKKLIGAKYFINAFLATHESFNSSESLDFIS 203
>At5g46200.1 68418.m05684 expressed protein contains similarity to
carboxyl-terminal proteinase contains Pfam profile
PF03080: Arabidopsis proteins of unknown function;
expression supported by MPSS
Length = 408
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 231 PILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQ-PVH 368
P++ +Q R R +L + N +R I + G+E +GQ P+H
Sbjct: 44 PLMKNHRIQTRPSRELLSILSTSNGNILREIDLKGSEECPKGQVPIH 90
>At3g62640.1 68416.m07036 expressed protein
Length = 110
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -1
Query: 409 VSAPTGIRMGEPESCTGCPRTKPSVPSMAMVRTVFSPKCCATSNTRRGERFCTSRAFRMG 230
V T + P+S P P S + RT +P + T+R +R T + + +
Sbjct: 27 VGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKRIATYKTYALE 86
Query: 229 GRLSS 215
G++ S
Sbjct: 87 GKVKS 91
>At3g29630.1 68416.m03726 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 448
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 480 AAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKDRSVRW 611
A I +F++ Q+++L+TG +D P K GK RW
Sbjct: 203 AEIEGNLCDFIERQCQRKVLLTGPMFLD---PQGKSGKPLEDRW 243
>At2g41590.1 68415.m05139 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 367
Score = 27.9 bits (59), Expect = 5.6
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +1
Query: 91 LQNVARLQLCLPSTRGTMRQ---KLQAKPKVRWL-QLSVLWLMYSSKTTCLP---F*MLS 249
+QN+ + + LP T G Q ++ V++L Q + +M K L F +
Sbjct: 48 VQNLNSVVVALPRTWGLTNQVHGRILDATYVQFLFQNEIDLMMVQRKEPWLFNNWFVAAT 107
Query: 250 RYKIAPLVSYWRSRSTWVKIRSEPLPW 330
R+++AP ++ + WV+IR PLP+
Sbjct: 108 RWEVAPAHNFVTTIDLWVQIRGIPLPY 134
>At1g28380.1 68414.m03487 expressed protein
Length = 612
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1
Query: 544 VTRISCCTDMSTN---SGASAWMAAVLSVGIGPRSSIGSPMT 428
VTR SC ++STN SG + ++ LS G+ P + P +
Sbjct: 498 VTRKSCWDNLSTNSRKSGVFSMISTRLSTGLSPNPATTKPQS 539
>At4g32500.1 68417.m04626 potassium channel protein, putative
similar to potassium channel [Solanum tuberosum]
gi|1514649|emb|CAA60016; similar to AKT1 [Arabidopsis
thaliana] gi|563112|gb|AAA96810; member of the 1 pore, 6
transmembrane (1P/6TM- Shaker-type) K+ channel family,
PMID:11500563
Length = 880
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 360 VVRALNPRYRPWQWF 316
+V +PRYR W WF
Sbjct: 70 IVSPFDPRYRAWDWF 84
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,449
Number of Sequences: 28952
Number of extensions: 327599
Number of successful extensions: 932
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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