Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P10
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 78 8e-16
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 55 8e-09
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 54 1e-08
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 46 5e-06
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 39 6e-04
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 30 0.21
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 28 1.1
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 27 1.9
SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 27 1.9
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 27 2.5
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 25 5.9
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 7.7
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 78.2 bits (184), Expect = 8e-16
Identities = 60/214 (28%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKKDGMMNNNDPXXXXXXXXXXXXXXEPQQHETPRGADILMELT 180
+D EKR YDR GEE L+ G +G D++ +
Sbjct: 56 ADEEKRATYDRFGEEGLQGGGADGGMSADDLFASFFGGGMFGGGMPRGPRKGKDLVHTIK 115
Query: 181 VSLEELYNGNFIEITRNKPVIKPAAGTR-----------KCN-CRQEMVTRNLGPGRFQM 324
V+LE+LY G ++ K VI P R CN + +TR +GP Q
Sbjct: 116 VTLEDLYRGKTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGP-MIQR 174
Query: 325 MQQTV---------------CDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHV 459
MQ T C EC K +++ ++L + VE G +G K + EGE
Sbjct: 175 MQMTCPDCNGAGETIRDEDRCKECDGAKVISQRKILTVHVEKGMHNGQKIVFKEEGEQAP 234
Query: 460 DGEPGDLIMVFRTERHPKYTRKGDDLYTNVTISL 561
PGD+I V + HP++ R GD L+ + L
Sbjct: 235 GIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDL 268
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 54.8 bits (126), Expect = 8e-09
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 367 VNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTRKGDDLYTN 546
V +R+LEI+V+ G G K + GEG+ DG D+ V + HP +TR GDDL
Sbjct: 240 VKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQ 299
Query: 547 VTISLQD 567
V +SL++
Sbjct: 300 VELSLKE 306
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 54.4 bits (125), Expect = 1e-08
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 34/222 (15%)
Frame = +1
Query: 4 DPEKREMYDRCG---EECLKKDGMMNNNDPXXXXXXXXXXXXX--XEPQQHETPRGADIL 168
DPE REMYD G + + DG +N +D + RG+D++
Sbjct: 62 DPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVI 121
Query: 169 MELTVSLEELYNGNFIEI--TRNK--PVIKPAAGTR-----KC-NCRQEMVTRNL---GP 309
+ +SLE+++ G +++ TRN P + G R C +C + V ++L GP
Sbjct: 122 HDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVGP 181
Query: 310 GRFQMMQQTVCDEC--PNVKF--------------VNEERLLEIEVEVGAPDGHKSRLRG 441
Q +CD C V F V E+R+L V A + K RG
Sbjct: 182 -HHVTNSQVICDTCNGKGVSFRGKDRCKHCKGSGTVPEQRMLSFFVNRSAKENDKIIQRG 240
Query: 442 EGEPHVDGEPGDLIMVFRTERHPKYTRKGDDLYTNVTISLQD 567
+ PGD+I+ + HP + R GDDL + ISL +
Sbjct: 241 MADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAE 282
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 45.6 bits (103), Expect = 5e-06
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 340 CDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHP-KY 516
C C + +I+V GAP+G++ RG+ + E GD+I++ +
Sbjct: 213 CPRCKGERVAEVVESFDIKVPAGAPEGYRIGFRGKADEIPGMEAGDIIVILEAAGGDYGW 272
Query: 517 TRKGDDLYTNVTISLQD 567
TRK +DLY TIS+++
Sbjct: 273 TRKDNDLYRKETISVRE 289
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECL 51
SDPE+R++YD GEE L
Sbjct: 60 SDPEQRKIYDAYGEEGL 76
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 38.7 bits (86), Expect = 6e-04
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Frame = +1
Query: 334 TVCDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGE--------PHVDGEPGDLIMV 489
+ C C V E + + I++ G D R+ G G P+ PGDL
Sbjct: 294 SACRSCMGSGTVRERKTVSIDIPPGIDDNTVLRVMGAGNDASTAKGGPNAKSRPGDLFAT 353
Query: 490 FRTERHPKYTRKGDDLYTNVTISL 561
+HP + R+G ++ N I +
Sbjct: 354 IHVRKHPFFVREGTNVTYNAKIPM 377
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 30.3 bits (65), Expect = 0.21
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKKD 60
SDP K+E+YD GE+ LK D
Sbjct: 63 SDPSKKEIYDNFGEQGLKTD 82
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 243 KASSWYSQV*LQTGDGDSQLRSWTF 317
K S+ + L GDGD QLRSW F
Sbjct: 875 KGSTIMPSLYLVRGDGDPQLRSWFF 899
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 27.1 bits (57), Expect = 1.9
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Frame = -1
Query: 459 YMWFTLTS*SRF---VSIWCTHF----YLNFQQSFFIYKFNIRTFIAYSLLHH----LET 313
++W+++ S F V I+C Y +F S F Y +NI F+ LLH LET
Sbjct: 573 FVWYSVISLVAFFVIVQIFCLARWNLGYNDFGPSAFHYNYNIGKFVVAWLLHWAPYILET 632
Query: 312 SRT*VASHHLLSAI 271
R V +H L A+
Sbjct: 633 DR--VFLYHYLPAL 644
>SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 835
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 166 LMELTVSLEELYNGNFIEITRNKPVIK 246
L++L + E+ + GNF+ +T N+ V+K
Sbjct: 672 LLQLQQTYEDQFTGNFVGLTVNEVVVK 698
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 166 KCLLLVASRVAAVRPQNENQSHQRNLQT 83
K +LV +++ A+RP++ +Q +Q LQT
Sbjct: 282 KVTILVLNKIDAMRPEDLDQKNQELLQT 309
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 558 RYSDIGVEVISFAGIFWMSFSSKHHDKVTRLPIYMWFTL 442
R SDI V A + +M + TR+P Y W L
Sbjct: 628 RVSDISVNFKRSADLIFMDCKRSVINTTTRIPPYFWVLL 666
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 307 PGRFQMMQQTVCDECPN--VKFVNEERLLEIEVEVGAPDGHKS 429
PG F+ +QQTV ++ P+ + V R E V P+ ++S
Sbjct: 354 PGAFEEVQQTVQEDLPHPTAETVEIARFAEQPVRAQQPEQYES 396
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,294,826
Number of Sequences: 5004
Number of extensions: 45199
Number of successful extensions: 109
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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