Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P10
(567 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19319| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 8e-16
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 60 1e-09
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 60 2e-09
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 38 0.004
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 31 0.085
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 33 0.22
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 32 0.28
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06) 29 2.0
SB_47306| Best HMM Match : I-set (HMM E-Value=0) 29 2.6
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.6
SB_50752| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12) 28 6.1
SB_18441| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12) 28 6.1
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 27 8.1
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_19319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +1
Query: 322 MMQQTVCDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTE 501
M + +CDECP V +VN+E++LE+EVE G + EGEPH+DGEPGDL
Sbjct: 8 MSPEEICDECPAVTYVNKEKILEVEVEQGMKHEQEYPFVSEGEPHIDGEPGDLKFKIIEL 67
Query: 502 RHPKYTRKGDDLYTNVTISLQD 567
RH ++TRKG DLY NVTI+L D
Sbjct: 68 RHKRFTRKGKDLYANVTITLND 89
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 80.6 bits (190), Expect = 8e-16
Identities = 65/216 (30%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKKDGMMNN-NDPXXXXXXXXXXXXXXEPQQHETPRGADILMEL 177
SD +KR++YD GE+ +K G + P + RG D++ +L
Sbjct: 115 SDEKKRKIYDEGGEDAIKGGGEGGGFHSPMDIFDMFFGTGRAAHQGER---RGKDMVHQL 171
Query: 178 TVSLEELYNGNFIEITRNKPVIKPAAGTR--KCNCRQEMVT----------RNLGPGRFQ 321
V+LEELYNG ++ K VI R K C + T + PG Q
Sbjct: 172 RVTLEELYNGATRQLALQKNVICSKCDGRGGKEGCVESCQTCHGSGMYVRINRIAPGMVQ 231
Query: 322 MMQQTVC-------------DECPNV---KFVNEERLLEIEVEVGAPDGHKSRLRGEGEP 453
+Q TVC D C N K V E ++LE+ ++ G DG K GEG+
Sbjct: 232 QIQ-TVCRDCGGKGEKIPEKDRCKNCHGKKVVRERKILEVHIDKGMKDGQKRTFSGEGDQ 290
Query: 454 HVDGEPGDLIMVFRTERHPKYTRKGDDLYTNVTISL 561
EPGD+++V + HP + R+G DL + I L
Sbjct: 291 DPGIEPGDIVIVLDEQEHPVFRRRGADLIIQMEIDL 326
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Frame = +1
Query: 232 KP-VIKPAAGTRKCNCRQEMVT-RNLGPGRFQMMQQTVCDECPNVKFVNEERL------- 384
KP ++P AG C R VT + +GPG Q MQ ++C +C +E +
Sbjct: 131 KPGAMRPCAG---CKGRGVKVTIKPIGPGMVQQMQ-SMCHDCSGEDDDGKENIRLAIPNG 186
Query: 385 ------LEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTRKGDDLYTN 546
++ V+ G DG K RGEG+ + EPGD+I+V + + H ++R+G DL+
Sbjct: 187 GDAFNTFQVHVDKGMSDGQKITFRGEGDQEPNVEPGDVILVIQQKDHDLFSRQGMDLFMT 246
Query: 547 VTISLQD 567
T++L +
Sbjct: 247 KTVTLAE 253
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKK 57
SDPEKRE+YDR GE+ L++
Sbjct: 55 SDPEKRELYDRYGEKGLRE 73
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKKDGMMNNNDPXXXXXXXXXXXXXXE---PQQHETPRGADILM 171
+D ++R++YD+ GEE LK G +++DP + PRG+D+ +
Sbjct: 78 ADDDQRKIYDQRGEEGLKNAGHRDHSDPFSSFFGGFGFHFDGHNGHSHSQQVPRGSDLTV 137
Query: 172 ELTVSLEELYNGNFIEI 222
+L V+LEELYNGNFIE+
Sbjct: 138 DLEVTLEELYNGNFIEV 154
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 370 NEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTRKGDD--LYT 543
+EE++L + V+ G G + EG+ P D++ + ++H +TR D+ LYT
Sbjct: 204 SEEKILTVNVKKGWKAGTRITFPKEGDQKPGRIPADIVFTIKDKKHEHFTRDNDNNILYT 263
Query: 544 NVTISLQD 567
V ISL+D
Sbjct: 264 -VKISLRD 270
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLK 54
SDP+KRE++D+ GEE LK
Sbjct: 56 SDPQKREIFDQYGEEGLK 73
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 352 PNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTRKGD 531
PN EE++L + V+ G +G K EG+ P D++ + + H +TR GD
Sbjct: 203 PNGSQRLEEKILTVNVKPGWKEGTKITFPKEGDRKPGVIPADVVFKIKDKPHKHFTRDGD 262
Query: 532 -DLYTNVTISLQD 567
+L ISL+D
Sbjct: 263 NNLVYKAKISLRD 275
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLK 54
SDP+K+E+YD+ GEE LK
Sbjct: 56 SDPKKKEIYDQYGEEGLK 73
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 130 PQQHETPRGADILMELTVSLEELYNGNFIEITRNKPVIKPAAGTRKCNCRQEMVTRNLGP 309
P + + + + +L VSLEELY G ++ ++ V P R ++++T N+ P
Sbjct: 164 PPKKQKVQDPPLERDLLVSLEELYKGTTKKMKISRKVPDPNGSQR---LEEKILTVNVKP 220
Query: 310 G 312
G
Sbjct: 221 G 221
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 30.7 bits (66), Expect(2) = 0.085
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 355 NVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTRKGDD 534
N +++ E+++L+IEV+ G G K EG+ D+I + + H + R ++
Sbjct: 132 NNEYIREDKILQIEVKPGWKAGTKITFPREGDMKPGIIASDIIFIIADKPHQFFKRDSEN 191
Query: 535 LYTNVT-ISLQD 567
V+ ++L+D
Sbjct: 192 NLIYVSKLTLKD 203
Score = 22.2 bits (45), Expect(2) = 0.085
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 175 LTVSLEELYNGNFIEITRNKPVI 243
L VSLEELY G+ ++ N V+
Sbjct: 107 LPVSLEELYIGSVRKLRINHQVL 129
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 373 EERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTR-KGDDLYTNV 549
EE+ L + ++ G G + EG+ +P D++ + + H +TR K ++L
Sbjct: 202 EEKTLIVNIKPGWKQGTRIVFPREGDRRPGKDPSDIVFKIKDKPHRHFTRDKDNNLIYKA 261
Query: 550 TISLQ 564
T+SL+
Sbjct: 262 TVSLR 266
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKK 57
SDPEKRE+YDR GE+ L++
Sbjct: 55 SDPEKRELYDRYGEKGLRE 73
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 376 ERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPKYTRKGDDLYTNVTI 555
+++L I V+ G K EG+ + P D++ + + + HP + R D+L T+
Sbjct: 187 DKILTINVKRGWRASTKITFPKEGDQGPNNIPADIVFIVKDKPHPIFKRDNDNLIYIATV 246
Query: 556 SL 561
L
Sbjct: 247 PL 248
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 334 TVCDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIMVFRTERHPK 513
T C +C VNE R + + V G +G R + G++ + FR
Sbjct: 253 TPCRKCRGKGRVNESRKITVPVPAGVDNGQTVR--------IPVSFGEVYVTFRVSESKI 304
Query: 514 YTRKGDDLYTNVTIS 558
+ R G ++Y++ +IS
Sbjct: 305 FERDGINIYSSASIS 319
>SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06)
Length = 421
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 149 HEEQTF*WNSQSL*KNFTMETLLK*LVINQL*SQQLVLASVIAD 280
H QT+ W +S+ K T+ET + ++QL SQ +L+ ++ D
Sbjct: 47 HSTQTYVWRPKSVWKRSTLETTFSMIPLSQLLSQ--LLSQILKD 88
>SB_47306| Best HMM Match : I-set (HMM E-Value=0)
Length = 1260
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 337 VCDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVD 462
V +E KF+++ER IEVE G K+R+RG+ EP ++
Sbjct: 659 VKEELTAPKFMDKERG-PIEVEEGEDVRLKTRVRGQPEPEIE 699
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKKDG 63
SD KR YD+ GEE LK +G
Sbjct: 78 SDENKRRQYDQFGEEGLKNNG 98
>SB_50752| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12)
Length = 381
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 423 VSIWCTHFY-LNFQQSFFIYKFNI 355
++I C HF+ NF Q F+++ NI
Sbjct: 63 ITIGCNHFFEFNFNQPFYVFVVNI 86
>SB_18441| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12)
Length = 381
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 423 VSIWCTHFY-LNFQQSFFIYKFNI 355
++I C HF+ NF Q F+++ NI
Sbjct: 63 ITIGCNHFFEFNFNQPFYVFVVNI 86
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 1 SDPEKREMYDRCGEECLKKDG 63
SD EKR++YD+ G+E L G
Sbjct: 58 SDKEKRDIYDKYGKEGLTSQG 78
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 124 PQNENQSHQRNLQTGHYYSSYHPFSNILHHNDH 26
P N +SH+R+ + H++ ++ ++ HH+DH
Sbjct: 939 PGNYPESHKRHRHSHHHHYQHYQYN---HHHDH 968
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,450,850
Number of Sequences: 59808
Number of extensions: 358304
Number of successful extensions: 811
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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