Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P08
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    28   0.062
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   5.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   7.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   9.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 27.9 bits (59), Expect = 0.062
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 368 GIPGKKGEIGDIGPMGSIGIPGARGLQGIQG 460
           G+ G +   G  G  G  G+ G +G+QG+QG
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQGVQG 873



 Score = 25.4 bits (53), Expect = 0.33
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 368 GIPG-KKGEIGDIGPMGSIGIPGARGLQGIQGPRRIKRI 481
           G+ G ++G  G     G  G+ G +G+QG+QG + ++ +
Sbjct: 836 GVQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGV 874



 Score = 24.2 bits (50), Expect = 0.76
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +2

Query: 422 GIPGARGLQGIQGPRRIKRIR 484
           G+ G +G+QG+QG + ++ ++
Sbjct: 852 GVQGVQGVQGVQGVQGVQGVQ 872



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +2

Query: 413 GSIGIPGARGLQGIQGPRRIKRIR 484
           G  G+  A+G+QG+QG + ++ ++
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQ 866



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 404 GPMGSIGIPGARGLQGIQGPRRIKRIR 484
           G  G     G +G+QG+QG + ++ ++
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQ 869


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 253 GEGLLPSDILPGERGETGFP 312
           G GL P D+    +G  G P
Sbjct: 330 GHGLQPPDLAGTSQGSAGLP 349


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 408 QWDPSEY 428
           QWDP+EY
Sbjct: 83  QWDPAEY 89


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/30 (23%), Positives = 13/30 (43%)
 Frame = -1

Query: 463 RALDSL*ASGSWYSDGSHWTYISYFTFFSR 374
           +  D L     W  +   W ++S  +FF +
Sbjct: 396 KVFDELLLDADWSVNAGMWMWLSCSSFFQQ 425


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 478 PFNPTRALDSL*ASGSWYSDGSHWTYI 398
           PF+  R L        +Y D + W YI
Sbjct: 285 PFHTQRLLYVYAQESDYYPDLNEWLYI 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,735
Number of Sequences: 438
Number of extensions: 2237
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)