Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P08
(493 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g44222.1 68414.m05107 hypothetical protein 35 0.026
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 34 0.045
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 34 0.045
At4g28520.3 68417.m04081 12S seed storage protein, putative / cr... 33 0.14
At4g28520.2 68417.m04079 12S seed storage protein, putative / cr... 33 0.14
At4g28520.1 68417.m04080 12S seed storage protein, putative / cr... 33 0.14
At5g28480.1 68418.m03462 hypothetical protein 31 0.42
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 31 0.42
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 31 0.42
At2g37410.2 68415.m04588 mitochondrial import inner membrane tra... 30 0.74
At2g37410.1 68415.m04587 mitochondrial import inner membrane tra... 30 0.74
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 30 0.97
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar... 27 5.2
At3g03090.1 68416.m00305 sugar transporter family protein simila... 27 6.9
At2g26590.1 68415.m03190 adhesion regulating molecule family sim... 27 6.9
At1g70650.1 68414.m08145 zinc finger (Ran-binding) family protei... 27 9.1
At1g15830.1 68414.m01900 expressed protein 27 9.1
>At1g44222.1 68414.m05107 hypothetical protein
Length = 85
Score = 35.1 bits (77), Expect = 0.026
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 338 IGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQG 460
+G PG G G+ G G G G +G +GI G G+ GI G
Sbjct: 5 LGRPGMLGSPGMLGILGMFGISGMVGRLGILGRLGMMGIPG 45
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 73 GERGWPGIEGLKGEQGENGEFGLDGFTGPVGL 168
G G PG+ G G G G FG+ G G +G+
Sbjct: 3 GRLGRPGMLGSPGMLGILGMFGISGMVGRLGI 34
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 34.3 bits (75), Expect = 0.045
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 350 GKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G GP G G G +G GPMG +G G + G GP
Sbjct: 325 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGP 362
Score = 31.1 bits (67), Expect = 0.42
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 338 IGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQG 460
+G G GP G G+ G +G +GP G + + G G G G
Sbjct: 327 MGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMG 367
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIG--IPGARGL 445
G G GP G G G +GPMG G P +GL
Sbjct: 343 GPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGL 379
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 34.3 bits (75), Expect = 0.045
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 350 GKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G GP G G G +G GPMG +G G + G GP
Sbjct: 424 GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGP 461
Score = 31.1 bits (67), Expect = 0.42
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 338 IGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQG 460
+G G GP G G+ G +G +GP G + + G G G G
Sbjct: 426 MGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMG 466
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIG--IPGARGL 445
G G GP G G G +GPMG G P +GL
Sbjct: 442 GPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGL 478
>At4g28520.3 68417.m04081 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 453
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 13 KGYRGDLGEPGIAISPKGQRGERG--WPGIEGLKGEQGENGEFG 138
+G +G G+P +GQ+G +G W G +G +G+QG G+ G
Sbjct: 133 QGRQGQQGQPWEGQGQQGQQGRQGQPWEG-QGQQGQQGRQGQQG 175
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPG--IEGLKGEQGENG 129
G +G +G G+P +GQ+G +G G EG +G+QG+ G
Sbjct: 147 GQQGQQGRQGQPWEGQGQQGQQGRQGQQGQPWEG-QGQQGQQG 188
>At4g28520.2 68417.m04079 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 394
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 13 KGYRGDLGEPGIAISPKGQRGERG--WPGIEGLKGEQGENGEFG 138
+G +G G+P +GQ+G +G W G +G +G+QG G+ G
Sbjct: 133 QGRQGQQGQPWEGQGQQGQQGRQGQPWEG-QGQQGQQGRQGQQG 175
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPG--IEGLKGEQGENG 129
G +G +G G+P +GQ+G +G G EG +G+QG+ G
Sbjct: 147 GQQGQQGRQGQPWEGQGQQGQQGRQGQQGQPWEG-QGQQGQQG 188
>At4g28520.1 68417.m04080 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 524
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 13 KGYRGDLGEPGIAISPKGQRGERG--WPGIEGLKGEQGENGEFG 138
+G +G G+P +GQ+G +G W G +G +G+QG G+ G
Sbjct: 133 QGRQGQQGQPWEGQGQQGQQGRQGQPWEG-QGQQGQQGRQGQQG 175
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPG--IEGLKGEQGENG 129
G +G +G G+P +GQ+G +G G EG +G+QG+ G
Sbjct: 147 GQQGQQGRQGQPWEGQGQQGQQGRQGQQGQPWEG-QGQQGQQG 188
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 31.1 bits (67), Expect = 0.42
Identities = 22/53 (41%), Positives = 25/53 (47%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEFGLDGFTGPVG 165
G G G GE G P G GE G G +G G G +GE G +G G VG
Sbjct: 426 GEGGPSGGDGEGG----PSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVG 474
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G G G +G G G G+ GP G G G G G GP
Sbjct: 426 GEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGP 466
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEFGLDGF 150
G G G GE G P G GE G G +G G G +GE G + F
Sbjct: 435 GEGGPSGGDGEGG----PSGGDGEGGPNGADGEGGPNGADGEVGDEAF 478
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G G G +G G G G+ GP G G G G G GP
Sbjct: 417 GEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGP 457
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 31.1 bits (67), Expect = 0.42
Identities = 22/53 (41%), Positives = 25/53 (47%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEFGLDGFTGPVG 165
G G G GE G P G GE G G +G G G +GE G +G G VG
Sbjct: 439 GEGGPSGGDGEGG----PSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVG 487
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G G G +G G G G+ GP G G G G G GP
Sbjct: 439 GEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGP 479
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEFGLDGF 150
G G G GE G P G GE G G +G G G +GE G + F
Sbjct: 448 GEGGPSGGDGEGG----PSGGDGEGGPNGADGEGGPNGADGEVGDEAF 491
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G G G +G G G G+ GP G G G G G GP
Sbjct: 430 GEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGP 470
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 31.1 bits (67), Expect = 0.42
Identities = 22/53 (41%), Positives = 25/53 (47%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEFGLDGFTGPVG 165
G G G GE G P G GE G G +G G G +GE G +G G VG
Sbjct: 430 GEGGPSGGDGEGG----PSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVG 478
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G G G +G G G G+ GP G G G G G GP
Sbjct: 430 GEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGP 470
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +1
Query: 7 GLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEFGLDGF 150
G G G GE G P G GE G G +G G G +GE G + F
Sbjct: 439 GEGGPSGGDGEGG----PSGGDGEGGPNGADGEGGPNGADGEVGDEAF 482
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 341 GMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGP 463
G G G +G G G G+ GP G G G G G GP
Sbjct: 421 GEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGP 461
>At2g37410.2 68415.m04588 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 374 PGKKGEIGDIGPMGSIGIPGARGLQGIQG 460
PG +G G G G G+PG +G+ G+QG
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 359 GPNGIPGKKGEIGDIGPMGSIGIPGARGLQ 448
G G+PG +G G G G G+PG +G+Q
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178
>At2g37410.1 68415.m04587 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 374 PGKKGEIGDIGPMGSIGIPGARGLQGIQG 460
PG +G G G G G+PG +G+ G+QG
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 359 GPNGIPGKKGEIGDIGPMGSIGIPGARGLQ 448
G G+PG +G G G G G+PG +G+Q
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 29.9 bits (64), Expect = 0.97
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 89 GQPRSPR*PFGLIAIPGSPKSPLYPFNPG 3
G P PR P G PG+P +P+ P NPG
Sbjct: 191 GPPSFPRNP-GSPEFPGNPGAPIIPRNPG 218
>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
{Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
sapiens] GI:3523150; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 633
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 16 GYRGDLGEPGIAISPKGQRGERGWPGIEG 102
GYR D G PG S G RG GW G
Sbjct: 79 GYRADAGRPGSG-SGYGGRGGGGWNNRSG 106
>At3g03090.1 68416.m00305 sugar transporter family protein similar
to xylose permease [Bacillus megaterium] GI:1924928;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 503
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 242 KEIKERAYFHLIFYPASVVKPVFQVLMAGQDFIGM 346
KE+ A+ +L+ +VV PVF +L+ G+ GM
Sbjct: 122 KELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGM 156
>At2g26590.1 68415.m03190 adhesion regulating molecule family
similar to oocyte membrane protein (GI:6174842) [Xenopus
laevis]; similar to Adhesion regulating molecule 1
precursor (110 kDa cell membrane glycoprotein) (Gp110)
(Swiss-Prot:Q16186) [Homo sapiens]; contains Pfam
PF04683: Adhesion regulating molecule conserved region
Length = 300
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 229 PKGIKGDQGEGLLPSDILPGE 291
P GI GDQ EGL DIL E
Sbjct: 188 PVGIAGDQDEGLALGDILKPE 208
>At1g70650.1 68414.m08145 zinc finger (Ran-binding) family protein
contains Pfam domain, PF00641: Zn-finger in Ran binding
protein and others
Length = 466
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 289 ERGETGFPGLDGRPGLYWNARKVWS*RHPWKKR*NRRYRSNG 414
E G GFP GR + +A K R WK +R RSNG
Sbjct: 382 EDGFMGFPVEGGRSNVSKSAEK----REQWKLEMTQRIRSNG 419
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 22 RGDLGEPGIAISPKGQRGERGWPGIEGL-KGEQGENGEFGLDGFTGP 159
RG GEP I +P +RG G P I G ++G GE + G P
Sbjct: 127 RGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPP 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,015,213
Number of Sequences: 28952
Number of extensions: 160100
Number of successful extensions: 503
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -