Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P07
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.60 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   1.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.2  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    20   9.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.60
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 460 RATLDDLCRWLVEYFRN 410
           ++  D LCR  VEYF+N
Sbjct: 141 KSVFDFLCRHTVEYFQN 157


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 317 LEPAGRDVNLEMPKFE 364
           + P G  +NL MPK+E
Sbjct: 137 MSPPGNVLNLTMPKYE 152


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 317 LEPAGRDVNLEMPKFE 364
           + P G  +NL MPK+E
Sbjct: 137 MSPPGNVLNLTMPKYE 152


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -3

Query: 190  SCSELFIFCIE*RLQ*MHSWL-LHYRCRVHMEIFLYSLTCVER 65
            SCS  ++ C+   L   +    LHY    HM  + Y + CV R
Sbjct: 1217 SCSSFYV-CVNGHLVPQNCAPGLHYNPEEHMCDWKYKVKCVGR 1258


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -1

Query: 381 SNPLFTSNFGISKFTSLPAGSSLNTSSMSPFSAAFSKTDD 262
           SNP ++S   ++  +S+P  +S  +    P + +   TD+
Sbjct: 92  SNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDN 131


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = -1

Query: 294 PFSAAFSKTDDKPSSXSGRMTTIRKSDSLYG 202
           PF     K    P + +G +   ++ D  YG
Sbjct: 10  PFGVLRFKAPQPPENWTGVLDATKEGDPCYG 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,108
Number of Sequences: 336
Number of extensions: 2387
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)