SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P06
         (436 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)              79   2e-15
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   7e-08
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)           40   7e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)             40   7e-04
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)             38   0.004
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)                   37   0.008
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)             36   0.011
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)                   35   0.025
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)              35   0.033
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)             33   0.10 
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)                   33   0.13 
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)                   33   0.13 
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)                   31   0.31 
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)                   31   0.41 
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)                    31   0.54 
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)             29   1.7  
SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.7  
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)                     29   1.7  
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)                 29   1.7  
SB_28536| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_15944| Best HMM Match : Response_reg (HMM E-Value=3.2e-06)          29   2.2  
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.0  
SB_50001| Best HMM Match : Carn_acyltransf (HMM E-Value=0.077)         27   5.0  
SB_51749| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.7  
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)            27   6.7  
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)                   27   6.7  
SB_57242| Best HMM Match : Extensin_2 (HMM E-Value=2.4)                27   8.8  
SB_22908| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)            27   8.8  

>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 78.6 bits (185), Expect = 2e-15
 Identities = 40/78 (51%), Positives = 50/78 (64%)
 Frame = -1

Query: 430 VTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVL 251
           VT  AG+ SYP DT+RRRMMM SG A   + YK +I C   I K EG  +  KGA +N+L
Sbjct: 221 VTVSAGLASYPIDTIRRRMMMTSGEA---VKYKGSIDCTIQILKKEGAMSLMKGAGANIL 277

Query: 250 RGTGGAFVLVLYDEIKKL 197
           RG  GA VL  +D+ K+L
Sbjct: 278 RGMAGAGVLAGFDKFKEL 295



 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 373 MMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR 248
           M+++GR   D  YK  I C +   ++EG  +F++G  +N +R
Sbjct: 43  MLKAGRL--DHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIR 82


>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 262

 Score = 53.6 bits (123), Expect = 7e-08
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = -1

Query: 421 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR 248
           V+   +YP D VRRRM M+  RA  D  YK+T+H +++I K EG    +KG + N+L+
Sbjct: 174 VSQTATYPLDVVRRRMQMKGIRA--DFAYKSTLHAFSSIVKLEGFRGLYKGMWPNILK 229


>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
          Length = 773

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -1

Query: 406 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR 248
           +YP D VRRRM M+ G       Y +T   +  I ++EG    FKG + N+L+
Sbjct: 699 TYPLDVVRRRMQMERGEGM--FKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLK 749


>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
          Length = 1026

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -1

Query: 403  YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVL 251
            YP D V+ RM  Q    +++ +YKN+I C+  + + EG    ++G    +L
Sbjct: 932  YPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982


>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
          Length = 868

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = -1

Query: 421 VAGIISYPFDTVRRRMMMQSGRAKSD--ILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR 248
           V   I  P D  + +M +Q  RA+S   I Y+N  H   TIA+T G    ++G  + ++R
Sbjct: 214 VVAFIEGPIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVR 273

Query: 247 G-TGGAFVLVLYDEIKKLL 194
                 F    Y+  K LL
Sbjct: 274 NIPANGFFFGFYEFTKNLL 292


>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 375

 Score = 36.7 bits (81), Expect = 0.008
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = -1

Query: 427 TTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKG---AFSN 257
           T +A +  YP + ++ R+ +Q    KS+  YK   H   TI + EG  A +KG   +F  
Sbjct: 163 TLIAMVTVYPCEVIKTRLTVQHVN-KSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221

Query: 256 VLRGTGGAFV 227
           +    GG+F+
Sbjct: 222 LFPFAGGSFL 231


>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
          Length = 187

 Score = 36.3 bits (80), Expect = 0.011
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 433 TVTTVAGIISYPFDTVRRRMMMQS---GRAKSDILYKNTIHCWATIAKTEGGAAFFKGAF 263
           T  + A   + P + V+ RM +Q     R    + Y+N  H   TIAK EG  A  KG F
Sbjct: 13  TAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLF 72


>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 328

 Score = 35.1 bits (77), Expect = 0.025
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -1

Query: 418 AGIISYPFDTVRRRMM-MQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGT 242
           A ++ +P DT++ R+  M   +     +YKN+  C+  I + EG    F+G    +L   
Sbjct: 52  ANLVGFPLDTIKVRLQAMPLPKPGEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSI 111

Query: 241 GGAFVL 224
               VL
Sbjct: 112 PNTTVL 117


>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
          Length = 577

 Score = 34.7 bits (76), Expect = 0.033
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = -1

Query: 427 TTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVL 251
           T +A +  YP + ++ R+ +Q    KS+  YK   H   TI + EG  A +KG   + L
Sbjct: 432 TLIAMVTVYPCEVIKTRLTVQHVN-KSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489


>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
          Length = 302

 Score = 33.1 bits (72), Expect = 0.10
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 418 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVL 251
           A +   P D ++ R+ + + R + +  Y   I C   I   EG AAF+KGA   ++
Sbjct: 219 ASVAVNPLDVIKTRLQLLN-RPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMI 273


>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 200

 Score = 32.7 bits (71), Expect = 0.13
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -1

Query: 409 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG-GAAFFKGAFSNVLRGTGG- 236
           ++YP D VRRRM + +G       Y   I+ + ++   +G     ++G   N LR     
Sbjct: 123 LAYPLDVVRRRMQL-AGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCPQV 181

Query: 235 AFVLVLYDEIKKLL 194
           A +  +Y+ +K+LL
Sbjct: 182 AVMFAVYEVVKQLL 195


>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 274

 Score = 32.7 bits (71), Expect = 0.13
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = -1

Query: 418 AGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVL 251
           AG++S    +PFD ++ R+       K    YK  + C     K EG   F +G +  +L
Sbjct: 142 AGVVSWASTFPFDVIKSRIQADGNLGK--FRYKGMMDCALQSYKEEGMIVFTRGIWPTLL 199

Query: 250 RG 245
           RG
Sbjct: 200 RG 201


>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 264

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 421 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG-GAAFFKGAFSNVLR 248
           V+  I+YP D VRRRM + +G       Y   I+    + K +G     ++G   N LR
Sbjct: 185 VSQTIAYPLDVVRRRMQL-AGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLR 242



 Score = 27.9 bits (59), Expect = 3.8
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 406 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGG-AAFFKGAFSNVL 251
           +YP D VR R+  Q  + +       TI C   I+  EGG  A +KG    +L
Sbjct: 82  TYPLDMVRSRLAFQVAQDQGYTTITQTIRC---ISVKEGGPKALYKGFVPTLL 131


>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 306

 Score = 31.1 bits (67), Expect = 0.41
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = -1

Query: 421 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGT 242
           +   I+ P D V+ R   Q+ +    I YKN  H +  IAK EG    + G    V R  
Sbjct: 127 IGSAIATPTDLVKIRF--QAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPTVKRAA 184

Query: 241 G-GAFVLVLYDEIKKLL 194
                 +  YD  K LL
Sbjct: 185 CISGTQIPTYDHTKHLL 201


>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 276

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -1

Query: 367 QSGRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLV-LYDEIKKL 197
           Q  R   D  Y+  +    T+ KTEG    +KG    + R    A + + LYD++K +
Sbjct: 56  QGVRTTHDAHYRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAM 113


>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
          Length = 383

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
 Frame = -1

Query: 421 VAGIISYPFDTVRRRMMMQSGRAKSDIL------------YKNTIHCWATIAKTEGGAAF 278
           V  +I YPF+TV  R+ +Q  R   D L            Y + + C+ TI + EG   F
Sbjct: 287 VPDLILYPFETVLHRLYIQGTRTIIDDLDNAADVIPLSTNYFSMLDCFRTIYQQEGIFGF 346

Query: 277 FKG 269
           ++G
Sbjct: 347 YRG 349


>SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1675

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 377  YDDAVRPCQERHSLQEHHTLLGDHCQD*GWSRLLQGRLLERAQR 246
            Y +A+RP       +    L+ +  +  G   +LQG+LLERA++
Sbjct: 1189 YLNAIRPLINDDDFENTQVLVNEFRKKGGIGEILQGKLLERAKK 1232



 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 377  YDDAVRPCQERHSLQEHHTLLGDHCQD*GWSRLLQGRLLERAQR 246
            Y +A+RP       +    L+ +  +  G   +LQG+LLERA++
Sbjct: 1280 YLNAIRPLINDDDFENTQVLVNEFRKKGGIGEILQGKLLERAKK 1323



 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 377  YDDAVRPCQERHSLQEHHTLLGDHCQD*GWSRLLQGRLLERAQR 246
            Y +A+RP       +    L+ +  +  G   +LQG+LLERA++
Sbjct: 1370 YLNAIRPLINDDDFENTQVLVNEFRKKGGIREILQGKLLERAKK 1413


>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 937

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 366 SPAVPRATFSTRTPYTAGRPLPRLRVEPPSSRAPSRT 256
           +P  P  T STR    A R LPR     P+ R  +RT
Sbjct: 386 APVRPSRTTSTRARERADRELPRRHSHGPNERGANRT 422


>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
          Length = 1706

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -2

Query: 249 EVPAVRSCWYCTMKSRSSSKSNVRIVTIINSIVIPYH 139
           E+P    C+YC   S +S++ +     + N +V+P++
Sbjct: 71  ELPGPEPCYYCDANSSNSNEQHPVTNLVDNELVLPFY 107


>SB_28536| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 467

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 288 EPPSSRAPSRTCSEVPAVRSCWYCTMKSRSSSKSNVRIVTIINSIV 151
           E   SR P RTC+E P   +   CT     +    +RI TI+ + V
Sbjct: 131 EGNDSRGPERTCTEPPGPET-ERCTTAGTGNPDEKLRIETILGADV 175


>SB_15944| Best HMM Match : Response_reg (HMM E-Value=3.2e-06)
          Length = 221

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 269 ALEEGGSTLSLGNGRPAVYGVLVENVALGTAGLHHHTPTNRV 394
           + E  G  +S+  G   +  V  EN+ +  A +  HT TNR+
Sbjct: 58  SFENSGIDVSIDGGENLIKAVQKENIPIKIAVITGHTETNRI 99


>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2956

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = -2

Query: 351  RATFSTRTPYTAGRPLPRLRVEPPSSRAPSRTCSEVPAVRSCWYCTMKSRSSSKSNVRIV 172
            + T+ T  P       PRLRVEP   R+P     E PA  +    T +  S   S+   +
Sbjct: 2343 KVTWPTPVPQDNADRKPRLRVEPKGMRSP----HEFPAGDTMITYTSEDESGLTSSCSFL 2398

Query: 171  TIIN 160
              IN
Sbjct: 2399 VTIN 2402


>SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1069

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 307 IAKTEGGAAFFKGAFSNVLRGT-GGAFVLVLYDEIKKLL 194
           IA+TEG  + FKG   N+L  T   A     Y ++K+ L
Sbjct: 796 IARTEGARSLFKGLCPNLLAVTPSRAIYFTTYQKLKEWL 834


>SB_50001| Best HMM Match : Carn_acyltransf (HMM E-Value=0.077)
          Length = 240

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 377 YDDAVRPCQERHSLQEHHTLLGDHCQD*GWSRLLQGRLLERAQR 246
           Y +A+RP       +    L+ +  +  G   +LQG+LLE+A++
Sbjct: 67  YLNAIRPLINDDDFENTQELVNEFRKKDGIGEILQGKLLEKAKK 110


>SB_51749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 174

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = -2

Query: 369 CSP--AVPRATFSTRTPYTAGR-PLPRLR--VEPPSSRAPSRTCSEVPAVRSCW 223
           C+P  + P AT  T TP       L  +R  V     R P R C E  +VR+CW
Sbjct: 6   CTPVHSPPNATVLTLTPLKKSLVDLTWIRTLVRLLEKRRPLRNCWEGRSVRACW 59


>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
          Length = 1439

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 363 PAVPRATFSTRTPYTAGRPLPRLRVEPPSSRAPSRTCSEVPAV 235
           P+V  ++    TP TA  P P   V  PSS  P+   +  P+V
Sbjct: 441 PSVFASSSGVPTPVTAPPPAPPPSVFAPSSGVPTPVAAPPPSV 483


>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 203

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 400 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGGAAFFK 272
           P + +++R+ M          Y+  IHC  ++ K EG  AF++
Sbjct: 17  PIEVIKQRLQMYGSP------YRGVIHCATSVFKEEGIRAFYR 53


>SB_57242| Best HMM Match : Extensin_2 (HMM E-Value=2.4)
          Length = 308

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 333 RTPYTAGRPLPRLRVEPPSSRAP 265
           RTPY+ GR LPR   +   SR P
Sbjct: 56  RTPYSFGRVLPRPTRQTRESRTP 78


>SB_22908| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 769

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 340 ECRSWHGRTASSYAYEPCR 396
           E R WH R  S   Y PCR
Sbjct: 736 ESRPWHNRAFSLLVYIPCR 754


>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
          Length = 1850

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 360  AVPRATFSTRTPYTAGRPLPRLRVEPP 280
            A P     TR P +  RP P+L   PP
Sbjct: 1606 ATPPPPLPTRRPSSCSRPAPQLSYRPP 1632


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,917,655
Number of Sequences: 59808
Number of extensions: 237209
Number of successful extensions: 779
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -