Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P05
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.8  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 571 HPAHTTTLCAWLNTVV 524
           HPA T +L  W+  V+
Sbjct: 259 HPASTQSLSRWIKMVL 274


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 445 GNIS*RDWYHIQTLISWMSNVPVATK*LRYLATHRG 552
           GNI+   W   +  I  + NV +A   L +L  H+G
Sbjct: 151 GNIAMELWNMPRENIEPLPNVILACHMLSFLMVHQG 186


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 GPALIMPFLMLRPIF 178
           GP L++PFL+    F
Sbjct: 561 GPPLVIPFLLFGGFF 575


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 GPALIMPFLMLRPIF 178
           GP L++PFL+    F
Sbjct: 561 GPPLVIPFLLFGGFF 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,417
Number of Sequences: 336
Number of extensions: 2598
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)