Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P05
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   4.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.6  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 25  LSKLNNIIITKRFTL 69
           L+KLNN I  KRF L
Sbjct: 99  LTKLNNAIEEKRFEL 113


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 335 KHHTRGSRPRAEFGTR 382
           +HH R  RPR  F  R
Sbjct: 154 RHHPRYKRPRTTFEPR 169


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 550 LCAWLNTVVIL*QPGHLTSMK*EFGCGTN 464
           L  +LNT ++L  P  +T +   FG G +
Sbjct: 562 LVCYLNTFLLLATPTTVTCILQRFGVGVS 590


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 550 LCAWLNTVVIL*QPGHLTSMK*EFGCGTN 464
           L  +LNT ++L  P  +T +   FG G +
Sbjct: 652 LVCYLNTFLLLATPTTVTCILQRFGVGVS 680


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,848
Number of Sequences: 438
Number of extensions: 3000
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)