Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P04
(567 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12733| Best HMM Match : Trypsin (HMM E-Value=2e-11) 91 8e-19
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.12
SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_24715| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11) 31 0.66
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 31 0.87
SB_10221| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20) 30 1.1
SB_41467| Best HMM Match : Plasmodium_HRP (HMM E-Value=3.4) 30 1.1
SB_10219| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 30 1.5
SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 30 1.5
SB_19792| Best HMM Match : SspH (HMM E-Value=6.6) 29 2.6
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 2.6
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_26154| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11) 28 6.1
SB_32138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 27 8.1
SB_2775| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_12733| Best HMM Match : Trypsin (HMM E-Value=2e-11)
Length = 376
Score = 90.6 bits (215), Expect = 8e-19
Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 14/110 (12%)
Frame = +1
Query: 4 GNSGGPLVNLDGEAIGIN--SMKVTSGISFAIPINYVKEFL----SKRQTKSPLVSKR-- 159
GNSGGPLVNLDGE IGIN ++K +GISFAIPI+ VK+FL +R KS +S R
Sbjct: 267 GNSGGPLVNLDGEVIGINVITVKFAAGISFAIPIDAVKDFLKGIPERRGLKSGGISPRRL 326
Query: 160 ------YLGITMLSLTPNILMELRMRNPEMPTDIENGILVWKVIIGSPAY 291
Y+GI+ML+L+P IL EL+ R+ DI +G+ V +V GSPA+
Sbjct: 327 GSRQRWYIGISMLTLSPQILEELQRRDSRF-EDINDGVFVAEVNFGSPAH 375
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 253 ILVWKVIIGSPAYNGGLQPGDIVTKINGQEVH--SATDVYNMLEKTTGSLRIDVVRGRQK 426
+ V V SPA+ G++ GD+V K+NG V +A V ++E + + ++ G Q
Sbjct: 102 VFVHNVEPKSPAFTVGMRTGDLVLKVNGVSVRHANAEQVQQVVEACGPIVSVVLIAGAQS 161
Query: 427 I 429
I
Sbjct: 162 I 162
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 253 ILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSATDVYNMLEKTTGS 393
+ V V GSPA L+PGD + +ING V + T + ++E GS
Sbjct: 484 VCVRSVDKGSPAAQARLKPGDHILEINGLNVRNKTHAH-VVELLKGS 529
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 277 GSPAYNGGLQPGDIVTKINGQEVHSATDVYNMLEKTTGS 393
GSPA L+PGD + +ING V + T + ++E GS
Sbjct: 324 GSPAAQARLKPGDHILEINGLNVRNKTHAH-VVELLKGS 361
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 196 ILMELRMRNPEMPTDIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSATDVY--N 369
+ +E + NP + D GI V V SPAY G L PGD + +NG+ V Y
Sbjct: 310 VRLEGGLDNPSLHGD--PGIFVQAVKKDSPAY-GKLYPGDRILSVNGERVTRVPRKYVEV 366
Query: 370 MLEKTTGSLRIDVVRGRQK 426
M++ G +R V R ++
Sbjct: 367 MIKMAEGVVRFYVKRAPKR 385
>SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 238 DIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSATD--VYNMLEKTTGSLRIDVV 411
++E V V PAY G++PGDI+ + ++V + ++L++ S+R+ VV
Sbjct: 415 EVEFMTFVLAVEEDGPAYMAGMRPGDIIVSVENRDVEEEDHRVLVSLLQEAPVSIRLVVV 474
>SB_24715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 253 ILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSATDVYNM 372
I V V +G A+ GL+PGD++ K+N +E D N+
Sbjct: 100 ISVAHVEVGLFAHGFGLRPGDVIHKVNDRECSGVQDTKNI 139
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Frame = +1
Query: 235 TDIENGIL--VWKVIIGSPA-YNGGLQPGDIVTKINGQEVHSAT--DVYNMLEKTTGSLR 399
+D E+G L + K+ G PA +G LQ GDI+ ++NG+ + +A+ D N++ + + +++
Sbjct: 1382 SDPEHGGLLRIKKMFPGQPATLSGKLQVGDIIQEVNGKSLANASHQDAINIIRQESPAVQ 1441
Query: 400 IDVVR 414
+ + R
Sbjct: 1442 LLIKR 1446
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 217 RNPEMPTDIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQEV--HSATDVYNMLEKTTG 390
+ P MP+ + V KV P+ GGL+PGD + ING+ + S + N++ T G
Sbjct: 531 KEPGMPSP---ALFVRKVF-APPSQVGGLEPGDEIVGINGKSIKGKSHEEAMNLIRHTQG 586
>SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1046
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -1
Query: 378 LQHIIDIGSAVHFLTVDLCHYIARLKSTVVSRRANNHFPDKNPVFNVRG 232
L+H+IDI V VD+C + +S + +R FP++ N+ G
Sbjct: 181 LEHLIDIEPGVVIRGVDICDHFIAFRSKLEARAIKLVFPEQALNLNIEG 229
>SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 244 ENGILVWKVIIGSPAYNGGL-QPGDIVTKINGQEVH-SATDVYNMLEKTTGSLRIDVV 411
+N +++ ++I G GL GDI+ ++NG+++ + +++ + L K+TG + + V+
Sbjct: 161 DNQLIISRIIHGGMIDRQGLLHVGDIIKEVNGKDMSGNPSELQDYLAKSTGKITLKVL 218
>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
Length = 881
Score = 31.1 bits (67), Expect = 0.66
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 268 VIIGSPAYNGGLQPGDIVTKINGQEV 345
++ SPA+ GL+PGD + +NG V
Sbjct: 304 ILASSPAHKAGLKPGDQILYVNGSSV 329
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 241 IENGILVWKVIIGSPA-YNGGLQPGDIVTKINGQEVHSAT--DVYNMLEKTTGSLRIDVV 411
+E I V +++ GS NG LQPGD + +NG+ + + T ++L+K T + + ++
Sbjct: 215 MEMMITVRRILPGSVCDRNGKLQPGDRLISMNGESLTNVTHSTALHILKKPTDKVVLVIL 274
Query: 412 RGRQKIT 432
R +T
Sbjct: 275 RDVHDLT 281
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 217 RNPEMPTDIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQ 339
RN PT V GS A+ GL+PGD++T +N +
Sbjct: 542 RNTTSPTQAAGPSPEHGVDHGSSAFEAGLRPGDLLTHVNDE 582
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 256 LVWKVIIGSPAYNGGLQPGDIVTKINGQ 339
LV V GS A+ GL+PGD++T +N +
Sbjct: 404 LVSGVDHGSSAFEAGLRPGDLLTHVNDE 431
>SB_10221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.7 bits (66), Expect = 0.87
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 459 SMHLGHDSQGYFLSPSNNVDPQTARGFLQH 370
S HLG D++ ++L +N V PQ + F++H
Sbjct: 656 SNHLGQDTKSFYLHVTNPVQPQGDQIFMKH 685
>SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)
Length = 285
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 292 NGGLQPGDIVTKINGQEVHSA--TDVYNMLEKTTGSLRIDVVRGRQ 423
+GGL+PGDI+ +N + + + +L+ +G++R+ V + R+
Sbjct: 190 HGGLRPGDILLAVNDRSLVGLEHSQAVRILKSVSGTVRLTVKKSRE 235
>SB_41467| Best HMM Match : Plasmodium_HRP (HMM E-Value=3.4)
Length = 225
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/65 (30%), Positives = 25/65 (38%)
Frame = +3
Query: 42 SDRNQQYEGDLGDLFRDSHQLRQGIFVQKANKVTASIKTLPRHHYAFPHTEHTHGTANEE 221
S R Q G FRD+H QG + T + H+ +HT GT
Sbjct: 30 SGRAQHTSGTRTTHFRDAHNTLQGRAQHTSGTRTTHFRDA--HNTLQGRAQHTSGTRTTH 87
Query: 222 SRDAH 236
RDAH
Sbjct: 88 FRDAH 92
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 48 RNQQYEGDLGDLFRDSHQLRQGIFVQKANKVTASIKTLPRHHYAFPHTEHTHGTANEESR 227
R Q G FRD+H QG +A + + + T H+A T+HT GT R
Sbjct: 76 RAQHTSGTRTTHFRDAHNTLQG----RAQRTSGTRTT----HFA-RRTQHTSGTHTTHFR 126
Query: 228 DAH 236
DAH
Sbjct: 127 DAH 129
>SB_10219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 459 SMHLGHDSQGYFLSPSNNVDPQTARGFLQH 370
S HLG D++ ++L ++ V PQ + F+QH
Sbjct: 819 SNHLGQDTKSFYLHVTDPVQPQGDQIFMQH 848
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 220 NPEMPTDIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSAT 357
NP P D E I V KV PA G L+PGD + ++NG + + T
Sbjct: 551 NPFDPAD-ETSIYVTKVQPEGPAAFG-LKPGDKILEVNGINLRNTT 594
>SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 235 TDIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSATDVYNMLE 378
T+++ I+V + SPA GL GD++ ++GQ++ S +++
Sbjct: 226 TEMDKFIMVDVITPKSPADLAGLHKGDVLIAVDGQKIESLKQAAKLIK 273
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 217 RNPEMPTDIENGILVWKVIIGSPAYNGGLQPGDIVTKINGQEVHSATDVYNMLEKTTGSL 396
++ ++ D+ N V+ IG PA ++ Q + S VYN+LEK +
Sbjct: 238 KDTKLSVDMRND--VYGQYIGYPAPTANTIKTTVIYPATAQHIASTQWVYNILEKKAETE 295
Query: 397 RIDVVRGRQKITLTIVPEM 453
R+ G + ++P+M
Sbjct: 296 RVVFEDGDPETGFVLLPDM 314
>SB_19792| Best HMM Match : SspH (HMM E-Value=6.6)
Length = 244
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 402 DPQTARGFLQHIIDIGSAVHFLTVDLCHYIARLKSTVVSRRANNHFPD 259
D QTAR + QH+ID +A + YI + + +R NH D
Sbjct: 90 DSQTARIYTQHVIDSQTARIYTQHTARIYIQHVNDSQTARIYTNHMND 137
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 253 ILVWKVIIGSPAYN-GGLQPGDIVTKINGQEVHSA--TDVYNMLEKTTGSLRIDVV 411
IL+ ++ G PA GGL GD + +NG ++ A D +L G + ++V+
Sbjct: 271 ILISEIHDGMPAARCGGLYVGDAILAVNGIDLQDAKHNDAVKILSSIHGEITMEVL 326
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = -1
Query: 444 HDSQGYFLSPSNNVDPQTARGFLQHIIDIGSAVHFLTVDLCHYIARLKSTVVSRRA--NN 271
H ++ ++ S V P L + + AV FL + + SR + N
Sbjct: 670 HFNRTIVIAKSQQVGPDKLWHILAIALAVAFAVSFLVNCIFLVVVCSLRNGQSRSSCNEN 729
Query: 270 HFPDKNPVFNVRGHLGIPHSQFHEYVRCEG 181
+PD+ P+ +V PH +F ++V +G
Sbjct: 730 SYPDEEPLKSVADSKKRPHFRFRQFVETKG 759
>SB_26154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Frame = +1
Query: 184 LTPNILMELRMRNPEMPTDIENGILVWKVIIG------SPAYNGGLQPGDIVTKINGQEV 345
+ PN+L P + G+L V +G +Y GG+ G+ V GQE+
Sbjct: 62 IVPNVLYSNNQMVPNLAYPYPPGVLPMPVYMGYAPIVPGASYQGGVPMGNFVLPGPGQEL 121
Query: 346 ----HSATDVYN--MLEKTTGSLRIDVVRGRQKITLTIV 444
H D+ ++E L IDV+ ++ + L ++
Sbjct: 122 YRRRHFTEDLIEEFLIEDIIPDLLIDVLSHKKTLALDVI 160
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 241 IENGILVWKVIIGSPAYNGGLQPGDIVTKINGQE--VHSATDVYNMLEKTTGSL 396
++NG ++ ++ GS A GG++ G + +ING+ V S + ++L T G +
Sbjct: 343 VQNG-MICSLMRGSIAERGGVRVGHRIIEINGESVVVTSHQHIVDLLATTIGEV 395
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 277 GSPAYNGGLQPGDIVTKINGQEV 345
GSPA G++ GD + ++NG V
Sbjct: 2691 GSPAERAGVRKGDFILQVNGNAV 2713
>SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11)
Length = 278
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +1
Query: 250 GILVWKVIIGSPA--YNGGLQPGDIVTKINGQEVHSAT--DVYNML 375
GI + +++ S A G L PGD V +INGQ + T +V+N++
Sbjct: 214 GIFISRIMDSSSAKFLAGLLNPGDEVLEINGQSTKTKTTAEVHNIM 259
>SB_32138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 316 IVTKINGQEVHSATDVYNMLEKTTGSLRIDVVRGRQKITLTIVPE 450
+V IN ++ S ++ + TGS +D R R++++LT+ PE
Sbjct: 6 VVNVINTVKLCSLDYRMSINQNNTGSDGVDCNRSRRRLSLTLAPE 50
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 277 GSPAYNGGLQPGDIVTKINGQEVHS--ATDVYNMLEKTTGSLRIDVVR 414
G Y G + PGDI+ KIN ++ S D + + + L + +V+
Sbjct: 497 GIAFYEGEIDPGDIILKINDKKADSLKLRDAIDEVRNSKDQLELVIVK 544
>SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 87 RDSHQLRQGIFVQKANKVTASIKTLPRHHYAFPHT 191
RD H++ VQ+ N++ IK L +H+ ++ T
Sbjct: 43 RDFHRMHHKRVVQEKNRLITDIKRLKKHYSSYEPT 77
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 268 VIIGSPAYN-GGLQPGDIVTKINGQEVHSA 354
++ GS A LQPGDI+ ++NG+ + +
Sbjct: 36 IVKGSAAEGVSNLQPGDIILEVNGKSIEES 65
>SB_2775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 280 SPAYNGGLQPGDIVTKINGQEVHSATDVYNMLE 378
SP Y G L +VTK+NG HS + L+
Sbjct: 78 SPPYEGRLHKKYVVTKVNGFWQHSVSKADEFLQ 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,931,264
Number of Sequences: 59808
Number of extensions: 415423
Number of successful extensions: 1050
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -