Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P04
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.8  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   4.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.6  

>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 92  IAKEIPEVTFILLIPIASPSKLTNGPP 12
           + + +P V   + I +ASP K   GPP
Sbjct: 374 VTQRLPAVLSRIGIILASPLKREGGPP 400


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 250 GILVWKVIIGSPAYNGG 300
           G+L+++++ G+P + GG
Sbjct: 552 GVLMFELLTGTPPFTGG 568


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 558 QRNNIPLHCR 529
           ++NN PLHC+
Sbjct: 343 RKNNCPLHCK 352


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 16   GPLVNLDGEAIGINSMKVTSGISFAIPINYVKEFL 120
            G  ++LDG+ +G    +  S  + ++P  +VK+ L
Sbjct: 963  GGAISLDGKPLGFPLDRPLSLGALSVPNIFVKDVL 997


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,748
Number of Sequences: 438
Number of extensions: 3950
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)