Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_P02
(568 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 58 7e-10
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 58 9e-10
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 35 0.007
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 27 2.5
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 26 4.4
SPAC23H3.12c |||conserved protein |Schizosaccharomyces pombe|chr... 26 4.4
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 25 5.9
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 25 7.7
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 25 7.7
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 58.4 bits (135), Expect = 7e-10
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +3
Query: 33 QFFQLFPELQSNRFFVSGESYGGKYVPALAYTIHKKNPTSNIKINLKGITIGNGLSDPIN 212
+F + FPE ++ +F++GES+ G+Y+P +A + +KN +NL G+ IGNG +P++
Sbjct: 156 KFLEEFPERANDEWFIAGESFAGQYIPHIAAKLKEKN-----LVNLGGLAIGNGWINPLS 210
Query: 213 QL-MYGKYLYQIGLIDWNQAKVFEKYENKTKQFIKQEQWLKAFETFDYLLNG 365
Y YL + G++D +E++ Q++ W + FD + +G
Sbjct: 211 HYETYLNYLVEKGMVD---------FESELGQYL-HHSWAECLLAFDKIGSG 252
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 58.0 bits (134), Expect = 9e-10
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Frame = +3
Query: 6 GEELYSTLIQFFQLFPELQSNRFFVSGESYGGKYVPALAYTIHKKNPTSNI--------- 158
G+++Y+ L FF FP+ F ++GESY G Y+P A I + N +N
Sbjct: 687 GKDVYAFLNLFFAKFPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGANFFVASGYEME 746
Query: 159 --KINLKGITIGNGLSDPINQ-LMYGK 230
INLK + IGNGL+DP+ Q YGK
Sbjct: 747 KQYINLKSVLIGNGLTDPLVQYYFYGK 773
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 35.1 bits (77), Expect = 0.007
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 12 ELYSTLIQFFQLFPELQSNRFFVSGESYGGKYVPALAYTIHKKNPTSNIKINLKGITIGN 191
+ + L F+Q FP L + ++ GESYG + A + P+ N IN G+ I +
Sbjct: 174 DFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEAL-LSEPSLN--INFMGVGIVS 230
Query: 192 GLS 200
GL+
Sbjct: 231 GLT 233
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 204 PINQLMYGKYLYQIGLIDWNQAKVFEKYENKTKQFIKQEQWLKAF 338
P+ L+ + L + GL+ + + KVF Y+ Q I + KAF
Sbjct: 223 PVQYLLQMRALSETGLL-YQELKVFSNYDPSVSQSIDGDNVSKAF 266
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 402 SYLKISFSLQSYLHSKDSQ 346
SYLK SFS +YL S+ SQ
Sbjct: 460 SYLKTSFSATTYLRSRLSQ 478
>SPAC23H3.12c |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 223 YIN*LMGSLKPLPIVMPFKLIFIFD--VGFFLC 131
+ N L+G++ LP+ +PF LI + GF+LC
Sbjct: 118 HTNYLIGNIIGLPLTIPFILIPLIPNIPGFYLC 150
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +3
Query: 321 QWLKAFETFDYLLNGDMIGEKSLFSNMTGFDFYFNYLHTK 440
+++ + + ++ L+ ++ +S FSN+ G D +F YL K
Sbjct: 365 EFVNSIQFYESQLSLVLMEIESKFSNIDGSDIHFRYLFLK 404
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 255 DWNQAKVFEKYENKTKQFIKQ 317
+W Q FE Y N +F+KQ
Sbjct: 516 EWRQLFKFENYRNLKNKFLKQ 536
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 207 INQLMYGKYLYQIGLIDWNQAKVFEKYENKTKQFIKQEQWLKAFETFDYLLN 362
+ +L Y + L L+ + +A+ F + + FIK E+W K F D + N
Sbjct: 39 LQKLGYTERLDDATLLRFLRARKFN-LQQSLEMFIKCEKWRKEFGVDDLIKN 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,549,666
Number of Sequences: 5004
Number of extensions: 57322
Number of successful extensions: 168
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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