Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P02
         (568 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)               62   3e-10
SB_59757| Best HMM Match : Gly_radical (HMM E-Value=3.5)               29   2.6  
SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044)                 29   2.6  
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.6  
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.1  
SB_7377| Best HMM Match : ELO (HMM E-Value=3.6e-06)                    27   8.1  

>SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)
          Length = 446

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   IGEELYSTLIQFFQLFPELQSNRFFVSGESYGGKYVPALAYTIHKKNPTSNIKINLKGIT 182
           I ++L +    F    P  Q+   ++  ESYGGK   A   T++       I+ N KG+ 
Sbjct: 133 IAQDLLTMFKAFVNEMPAFQTIPLYIFCESYGGKMTSAFGVTLYNAIQQGEIRCNFKGVA 192

Query: 183 IGNGLSDPINQ-LMYGKYLYQIGLIDWNQAKVFEKYENKTKQFIKQEQWLKA 335
           +G+    P++  L +G YLY   L+D        +Y   T   +  ++W KA
Sbjct: 193 LGDSWISPVDSVLSWGPYLYSASLLDQLDLDRVNQYAQATANAVANQEWKKA 244


>SB_59757| Best HMM Match : Gly_radical (HMM E-Value=3.5)
          Length = 389

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 315 QEQWLKAFETFDYLLNGDMIGEKSLFSNMTGFDFYF--NYLHTKDY 446
           Q Q+  AF   D+L +G   G   L  N  G+D+YF   YL T  +
Sbjct: 61  QTQFYHAF--CDWLFDGSNAGYTCLAHNFKGYDYYFILEYLFTNGF 104


>SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1307

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 339 ETFDYLLNGDMIGEKSLFSNMTGFDFYF--NYLHTKDYTQFEDF 464
           ++F +L NG   G   L  N  G+D YF   YL T  +   E F
Sbjct: 68  QSFCWLFNGSNAGYTCLAHNFKGYDSYFILEYLFTNGFKPEEIF 111


>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 353

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 323 LLLFYKLFSFIFILLKDFSLIPVYKTN 243
           LL  + LFS I ++  +F   P+YKTN
Sbjct: 9   LLKTFSLFSLIALVRSEFLFTPIYKTN 35


>SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044)
          Length = 899

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = +3

Query: 57  LQSNRFFVSGESYGGKYVPALAYTIHK--KNPTSNIKINLKGITIGNGLSDPINQLMYGK 230
           L +N    + + Y  K+ P   + I+K  K  TS  K+NL  IT+   L+D     +   
Sbjct: 666 LSTNNSIKALQPYINKFNPNCDF-INKVLKENTSIKKLNLFEITMSYVLADEFIAALAMT 724

Query: 231 YLYQIGLIDWNQA--KVFEKYENKTKQFIKQEQWLKAFETFDYLLNGDMIGEKSLFS 395
            L++  LID + +  K+  K      + + + QWL+ F     +L+ + IG++   S
Sbjct: 725 QLHKPSLIDLDLSLNKISSKGCIAIAEMLSKNQWLETF-----ILSYNQIGDEGAMS 776


>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1480

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 348 DYLLNGDMIGEKSLFSNMTGFDFYF--NYLHTKDYT 449
           D+L +G   G   L  N  G+D YF   YL T  +T
Sbjct: 435 DWLFHGSNAGYTCLAHNFKGYDSYFILEYLFTNSFT 470


>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 842

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 VFEKYENKTKQFIKQEQWLKAFETFDYLLNG 365
           V E+ E+K  QFI+Q+Q LK+    DY L G
Sbjct: 359 VMEEQEHKIAQFIEQQQELKSM--LDYRLPG 387


>SB_7377| Best HMM Match : ELO (HMM E-Value=3.6e-06)
          Length = 255

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 159 LYLMLDSFYVLYKLVLVHIFLHMIHHLQRI 70
           LY+ L+ F++L K      FLH+ HH   +
Sbjct: 80  LYIFLEMFFILRKKNNQISFLHVYHHFSMV 109


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,166,285
Number of Sequences: 59808
Number of extensions: 352775
Number of successful extensions: 858
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)