Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_P02
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   4.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   4.9  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   6.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.6  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 371 HISIQKIVKCFKSFQPL 321
           HI I KI +CF  ++ +
Sbjct: 113 HIKISKIFQCFMKYKTI 129


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 346 NVSKAFSHCSCFINC 302
           N+ K  ++ SCFI C
Sbjct: 67  NIKKYLTNYSCFITC 81


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 542 YHSSIMEWKISNVY 501
           YH  ++EWK   +Y
Sbjct: 136 YHQGLVEWKPPAIY 149


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 75  FVSGESYGGKYVPALAYTIH 134
           FV G+ Y GKY+   +  +H
Sbjct: 147 FVPGDDYDGKYLVLPSGELH 166


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 NGTVVEEHLKED 563
           NGT++ +H+KED
Sbjct: 768 NGTLLLQHVKED 779


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 NGTVVEEHLKED 563
           NGT++ +H+KED
Sbjct: 764 NGTLLLQHVKED 775


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 423 NYLHTKDYTQFEDFGPM 473
           +Y+H  D+   E FG M
Sbjct: 373 SYIHDPDHRYLESFGVM 389


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,559
Number of Sequences: 438
Number of extensions: 3727
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)