Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_O24
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 56 1e-08
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 55 4e-08
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 52 4e-07
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 52 4e-07
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 51 5e-07
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 51 6e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 49 2e-06
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 48 4e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 47 8e-06
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 46 2e-05
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 45 3e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 45 4e-05
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 44 5e-05
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 44 5e-05
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 44 5e-05
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 44 7e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 44 9e-05
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 44 9e-05
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 43 1e-04
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 43 1e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 43 1e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 2e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 40 9e-04
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 40 0.002
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 37 0.008
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 37 0.011
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.014
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 36 0.025
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 35 0.033
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 35 0.043
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.057
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 32 0.31
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.53
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38) 29 2.2
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 29 2.8
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_31205| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_2745| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 27 8.7
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 27 8.7
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = +3
Query: 306 CGVEDTV---VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
CG+ V + +IVGG T+ +PW V I Y++ H +CGGS+++S++++TAAHCV
Sbjct: 1770 CGIRPIVGSSLQQIVGGKVTEHGAWPWQVQIGYKTMGH---ICGGSIVNSQWIVTAAHCV 1826
Query: 477 T 479
T
Sbjct: 1827 T 1827
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +3
Query: 285 LESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 464
+++N E CGV D+ +++V G+D + ++PW + +CGGSLI+ ++VLTA
Sbjct: 45 VQTNAEHCGVSDSASSRVVSGDDATLGEWPWQAWLHVTPHG---FVCGGSLIAPQWVLTA 101
Query: 465 AHCV 476
HC+
Sbjct: 102 GHCI 105
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +3
Query: 162 VRQSVCNGPETFS---VCCGPPPEINPEDMTLNERCSRAVTAFPLESNNECCGVEDTVVN 332
+R CN P VC G E N E +RC P CGV + +
Sbjct: 381 LRSRKCNNPTPQGGGRVCAG---EGNQEKACNTQRCGAKPVLAPF-----ICGVRNAL-G 431
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+IVGG K+ +PW ++ D ++CGGSLI+ ++V+TAAHC+
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHCI 477
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVT 479
+IVGG+DT YPW V+I + CGGSLIS K+VLTAAHCVT
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRKGGH----VACGGSLISEKWVLTAAHCVT 151
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESF--DHMKLLCGGSLISSKYVLTAAHCV 476
+I GG+D+ YPW V +E+++F ++ CGG+LI+ +VLTAAHCV
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCV 1209
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
CGV ++IVGGND ++PW ++ +++ K CGG+L+ +V+TA+HC+
Sbjct: 202 CGVRPPA-SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCI 257
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +3
Query: 294 NNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
N E CG + +++ G++ + ++PW + + H +CGGSL++ +VLTAAHC
Sbjct: 18 NLETCGRAEVPATRVISGSEALLGEWPWQAWLHLQ---HTGFICGGSLVAPGWVLTAAHC 74
Query: 474 V 476
+
Sbjct: 75 I 75
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+I+ G+D + +PW+V I Y + H CGG+L+S ++V+TAAHCV
Sbjct: 351 RIISGSDAQPNSWPWMVQINYNNGHH----CGGTLVSPQWVVTAAHCV 394
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 50.8 bits (116), Expect = 6e-07
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 231 PEDMTLNERCSRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDH 410
PE+ L +R V F N CG + ++++ G D +PW + + S
Sbjct: 5 PENTLLTHPRNR-VQGFFFREKNPACGQRPSQ-SRVINGVDATAHAWPWQISLRMMSKKG 62
Query: 411 MKL-LCGGSLISSKYVLTAAHCVTG 482
CGGSLI S++VLTAAHCV G
Sbjct: 63 DDYHFCGGSLIDSEWVLTAAHCVAG 87
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
CG ++++GG D +PW + ++ +CGGSL+SS +V+TAAHCV
Sbjct: 467 CGYTPITQSRVIGGKDAIPGAWPWQIALKSRG----NFICGGSLVSSTWVVTAAHCV 519
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +3
Query: 306 CGVEDTVVN-KIVGGNDTKITQYPWLV-VIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
CG T + +IVGGN+ +PW V + ++ + +CGG+LI+ ++VLTAAHC
Sbjct: 116 CGESQTNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
CG++ T + I+GG D + ++PW V + H +CGG+L++S++VLTAA C
Sbjct: 250 CGIKYT--SNIIGGTDAAVGEWPWQVSLY---LTHYGPVCGGTLLTSEWVLTAARC 300
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 282 PLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLT 461
PL +N CG + +I+ G + + +PW + + S H CGGSLIS ++V+T
Sbjct: 89 PLPPSNGKCGRKPAGA-RIINGQNAQPHSWPWQISLRGRSGFHT---CGGSLISDRWVVT 144
Query: 462 AAHCV 476
AAHC+
Sbjct: 145 AAHCI 149
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAA 467
+I+ G + + +PW + + S H CGGSLIS ++V+TAA
Sbjct: 428 RIINGQNAQPHSWPWQISLRGRSGFHT---CGGSLISDRWVVTAA 469
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 RCSRAVTAF-PLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGG 431
RC F P + CG +++IVGG+ +PW V++ Y S + CGG
Sbjct: 605 RCGNYTPTFRPTPPHVPVCGHRP--LSRIVGGSTAPPGAWPWQVMLIYNSG---RQFCGG 659
Query: 432 SLISSKYVLTAAHCV 476
+L++ ++V+TAAHCV
Sbjct: 660 TLVTPEWVITAAHCV 674
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 264 RAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLIS 443
+A +A ++ +++ CG + ++V G++ + +PW V + CGG+LI
Sbjct: 20 QARSARSIDIDSDKCGQRSILEKRVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALID 79
Query: 444 SKYVLTAAHCV 476
++V+TAAHCV
Sbjct: 80 REWVVTAAHCV 90
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPW-LVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTG 482
CGV+ ++IVGG + I +PW +++ + D CGGSLI +VLTAAHC+ G
Sbjct: 21 CGVKPGG-SRIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVG 76
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAI 488
+++GG D +PW + + K +CGG+LIS +VLTA HCV G +
Sbjct: 435 RVIGGEDAAPHSWPWQISLRVRG----KHMCGGTLISPDWVLTAGHCVHGQL 482
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+I+ G + + +PW + + H LCGG+LIS ++V+TA+HC+
Sbjct: 845 RIINGQNAQPHSWPWQISLRQGRRFH---LCGGALISDRWVVTASHCI 889
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +3
Query: 279 FPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVL 458
F L ++E CG + +++V G++ +PW + + + +CGGSLI+ ++VL
Sbjct: 63 FALLGSSEGCG-QRPFQSRVVNGDNAAQHSWPWQISLRVNG----RHICGGSLITPEWVL 117
Query: 459 TAAHCV 476
TAAHCV
Sbjct: 118 TAAHCV 123
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 327 VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+++++GG + +PW V + CGG+LISSK+V+TAAHCV
Sbjct: 474 MSRVIGGEAARPYSWPWQVSVSMGKLHS----CGGALISSKWVITAAHCV 519
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 330 NKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
++IVGG + +PW ++ Y + +H CGG+L+ ++V+TA+HCV
Sbjct: 247 SRIVGGTTAQRGAWPWQAMLRYYNGNHF---CGGTLVHPRWVVTASHCV 292
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKL--LCGGSLISSKYVLTAAHC 473
CG + +IVGG K +PW + + Y K +CGGS+++ ++++TAAHC
Sbjct: 94 CGTKGKGNTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHC 151
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+I+GG + I Q+PW+V + +S CGGSL+ +++TAAHC
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSAQ----ACGGSLVPEDWIVTAAHC 82
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +3
Query: 291 SNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAH 470
S CG V +IVGG++ +PW V I + H +CGGSL+S ++LTAAH
Sbjct: 17 SEASSCGRRPDGV-RIVGGDEAVPHSWPWQVSIRLKG-SH---ICGGSLLSPLWLLTAAH 71
Query: 471 CV 476
CV
Sbjct: 72 CV 73
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYES-FDHMKLLCGGSLISSKYVLTAAHCVTG 482
CG+ +IVGG K +PW + S F + CGGSLI +++LTA HCV+G
Sbjct: 46 CGIRPHT--RIVGGTAAKQNSWPWQAQLRTTSGFPY----CGGSLIHPQWILTATHCVSG 99
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 44.4 bits (100), Expect = 5e-05
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
++VGG++ K Q+PW + + ++ + CGG+L+ ++V+T AHC
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQY----CGGALVHERWVVTGAHC 70
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
CG +++V G++ + +PW + + + +CGGSLI+ +V+TAAHCV
Sbjct: 22 CGKRPYGTSRVVNGDNAQQHSWPWQISLRVNG----RHICGGSLIAKDWVVTAAHCV 74
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 44.0 bits (99), Expect = 7e-05
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +3
Query: 213 PPPEINPEDMTLNERCSRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIE 392
PPP T +RA P + CG + + +IVGG + + +PW ++
Sbjct: 183 PPPTTTAAITTKVPVTTRAPITQPPSGS---CGSKPSGT-RIVGGTEAPVNGWPWQAMLR 238
Query: 393 YESFDHMKLLCGGSLISSKYVLTAAHCV 476
CGGSLI ++VLTAAHC+
Sbjct: 239 SAGGSQF---CGGSLIHPEWVLTAAHCL 263
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 336 IVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
I+GG + + ++PW V ++ S + +CGG++IS +VLTAAHCV
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNS-SSLPHICGGNVISPWWVLTAAHCV 591
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYES-FDHMKLLCGGSLISSKYVLTAAHCVT 479
CGV + ++IVGG +PW + + F + CGGSLI S +VLTAAHC++
Sbjct: 382 CGVSSST-SRIVGGAAANPGDWPWQAQLRTTTGFPY----CGGSLIHSNWVLTAAHCIS 435
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+IVGG + K +PWL I + CGG+LI+ +V+TAAHC
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVKG----SFRCGGALIARDWVVTAAHC 765
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 222 EINPEDMTLNERCSRAVTAFPL-ESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYE 398
+I +D+T+ +R FP ++ CGV + +IVGG K +PW +
Sbjct: 629 DIAIDDVTIKSCATRP--PFPTTQAPVASCGVRPST--RIVGGTAAKQGDWPWQAQLRST 684
Query: 399 SFDHMKLLCGGSLISSKYVLTAAHCVT 479
S CGGSLI ++VLTA HCV+
Sbjct: 685 SGFPF---CGGSLIHPQWVLTATHCVS 708
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 420 LCGGSLISSKYVLTAAHCVTGA 485
+CGGSL+S +V+TAAHC+ G+
Sbjct: 92 ICGGSLVSPTWVVTAAHCIAGS 113
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+IVGG + + +PW ++ CGGSLI ++VLTAAHC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLRSAGGSQF---CGGSLIHPEWVLTAAHCL 303
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 303 CCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
CCG +++V G + +PW + + H +CGGSLI+ ++VLTAAHCV
Sbjct: 28 CCG-RRPASSRVVNGANAPQHAWPWQISLRTNG-QH---ICGGSLITPEWVLTAAHCV 80
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYES-FDHMKLLCGGSLISSKYVLTAAHCV 476
CG+ +IVGG K +PW + S F + CGGSLI+ +++LTA HCV
Sbjct: 3 CGIRPNT--RIVGGTAAKHGDWPWQAQLRTTSGFPY----CGGSLIAPQWILTATHCV 54
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 330 NKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
++IVGG + +PW V I ++ + CGGSLI ++LT++HC
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC 291
Score = 30.7 bits (66), Expect = 0.71
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHCV 476
CGGS+I +V+TA HCV
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHC 473
CGGSLI ++V+T+ HC
Sbjct: 561 CGGSLIDKQWVVTSGHC 577
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +3
Query: 180 NGPETFSVCCGPPPEINPEDMTLNERCSRAVTAFPLESNNEC------CGVEDTVVNKIV 341
N +T C PPP P T+ T P + CG + +IV
Sbjct: 84 NCKKTCGTCGDPPPPATPPPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHT--RIV 141
Query: 342 GGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
GG +PW ++ ++ CGG+L+ ++V+TAAHCV
Sbjct: 142 GGTKAPPGAWPWQAMLRS---NYGGQFCGGTLVHPQWVITAAHCV 183
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 306 CGVED-TVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
CG + T +IVGG ++ +PW + H CGGS+I S++V+TAAHC
Sbjct: 16 CGRKTYTRKRRIVGGIESANGAWPWQAALFLNGTHHR---CGGSVIKSQWVVTAAHC 69
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 327 VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+++I+GG +PW I CGG+LI +++V+TAAHCV
Sbjct: 282 MSRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCV 331
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 315 EDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVT 479
E T +IV G D +PW + Y+ H +CG SL++ + LTAAHC+T
Sbjct: 234 EKTPPLRIVNGEDAVPHSWPWQLSFRYKG-SH---ICGASLLTPGWALTAAHCLT 284
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 40.3 bits (90), Expect = 9e-04
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+IVGG + +PW V + H CGGSLI ++V+T+ HC
Sbjct: 249 RIVGGREASPNSWPWQVDLVVNGTRHN---CGGSLIDKQWVVTSGHC 292
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHC 473
CGGSLI ++LT++HC
Sbjct: 15 CGGSLIDPYWILTSSHC 31
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Frame = +3
Query: 192 TFSVCCG-----PPPEINPEDMTL--NERCSRAVTAFPLESNNECCGVEDT--VVNKIVG 344
T CCG PP I +D+ NER P NN C +++ VV +VG
Sbjct: 1033 TAVTCCGAFVHDPPSNIWLDDVRCRGNERSIFRCAHRPWGINN--CNMKELAGVVCHLVG 1090
Query: 345 GNDTKITQYPW-LVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+ +PW +++ F C G LIS+++V+TAAHC
Sbjct: 1091 ATPSPPEDWPWQTMILNRRRFP----FCSGVLISARHVITAAHC 1130
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+++ G + + +PW + + H CGG+LIS ++V+TA+HCV
Sbjct: 29 RVINGQNAQPHSWPWQISLRPYGRYHS---CGGTLISDRWVVTASHCV 73
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
+IV G + +PW+ + ++ CG +LI + +TAAHCV
Sbjct: 325 RIVNGQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHCV 370
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 420 LCGGSLISSKYVLTAAHCV 476
+CGGSL+SS +VLTAAHCV
Sbjct: 339 ICGGSLLSSTWVLTAAHCV 357
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 306 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
CG++ + +IVGG +PW + S CGG+L+ ++V+TA+HC+
Sbjct: 16 CGMKPST--RIVGGTAAPKNAWPWQAQLRSASGFPF---CGGTLVHPRFVVTASHCI 67
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 312 VEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
V + V +IVGG + +PW I Y+ L G+LI S++VLT A+ V
Sbjct: 85 VNSSRVRRIVGGKISAKAAWPWQAAIYYKDRGR-NFLFNGALIKSRWVLTVANAV 138
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+IVGG + +PW V + CGGSL++ +V+TA HC
Sbjct: 53 RIVGGVEAAPGAWPWQVALLMNGTQ----FCGGSLVNENWVVTARHC 95
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 35.5 bits (78), Expect = 0.025
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 393 YESFDHMKLLCGGSLISSKYVLTAAHCV 476
+ S H+ C G+LIS+++VLT+AHCV
Sbjct: 169 FSSIVHISTGCTGTLISTRHVLTSAHCV 196
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.1 bits (77), Expect = 0.033
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+IVGG + +PW V + + +C GSLI +++++TA HC
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLND----RQVCAGSLIEARWIITAGHC 95
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 34.7 bits (76), Expect = 0.043
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 333 KIVGGNDTKITQYPWLVVIE-YESFDHMKLLCGGSLISSKYVLTAAHCV 476
+I+ G + +PW + + Y S + CG SL+S + LTAAHCV
Sbjct: 85 RIINGEEAVPNSWPWQLSLRVYGSHN-----CGASLLSPGWALTAAHCV 128
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 34.3 bits (75), Expect = 0.057
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 369 YPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 473
+PW V + + CGG+LI++ +VLTAAHC
Sbjct: 1250 WPWQVALTLSGNPVQR--CGGALIAADWVLTAAHC 1282
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHCV 476
C G+LIS ++VLT+AHCV
Sbjct: 168 CSGTLISRQHVLTSAHCV 185
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHCV-TGAILIEG 500
C G+L+S ++VLTAAHC+ TG +G
Sbjct: 168 CTGTLVSPRHVLTAAHCLHTGRDYTKG 194
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 31.1 bits (67), Expect = 0.53
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +3
Query: 342 GGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 476
G +PW ++ + F ++ C G+L+ ++++T AHC+
Sbjct: 667 GWQPAHANSWPWTALLHFGGFLDIEG-CMGTLVDQEWIMTTAHCL 710
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHCV 476
C G L+ K+VLTAAHCV
Sbjct: 124 CTGVLVGPKHVLTAAHCV 141
>SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38)
Length = 667
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 6 CGYENNIPMVCCPISNACKTPDDKPGICVGLYNC 107
C + IP +C P ++AC T DD C+G C
Sbjct: 530 CPVMSRIPYMCNPTTHACDTDDD----CIGGAKC 559
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 423 CGGSLISSKYVLTAAHCV 476
C G+LI +V+TAAHC+
Sbjct: 153 CSGTLIGPCHVITAAHCI 170
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 414 KLLCGGSLISSKYVLTAAHCV 476
+L C G+L+S ++V+TAA C+
Sbjct: 49 ELQCSGALVSPRWVVTAASCL 69
>SB_31205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1528
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 39 CPISNACKTPDDKPGICVGLYNCE 110
C N C+ P +C G NCE
Sbjct: 1436 CKCGNCCEMPQQIENVCCGKRNCE 1459
>SB_2745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = -3
Query: 482 SSDTVCSSEHVLRTDE*ATA*QLHMIKTLIFDHHKPWILXDFCVISTDNFINNGVFDSTT 303
++D + +++H++ TD T L L+ H ++ C+++TD+ +N G +T
Sbjct: 182 NTDHLVNTDHLVNTDCLVTTGCLVNTDRLVNTDH---LVTTGCLVNTDHLVNTGCLVNTD 238
Query: 302 LVV 294
+V
Sbjct: 239 CLV 241
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = -1
Query: 499 PSIKIAPVTQCAAVSTYFELMSEPPHSSFI*SKLSYSITTSHGYXVIFVSFPPTILLTTV 320
P+ P + ++Y S P S+ S SY+ TTS+ + S P T+
Sbjct: 118 PTPSYTPTPSYTSTTSYTPTTSYTPTPSYT-STTSYTSTTSYTSTTSYTSTPSYTSTTSY 176
Query: 319 SSTPQHS 299
+ST ++
Sbjct: 177 TSTTSYT 183
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -1
Query: 388 ITTSHGYXVIFVSFPPTILLTTVSSTPQHSLLLSSGKAVTALEHLSLRVISS 233
+TTS + V PP I ST HSL K T+ H S V S
Sbjct: 84 VTTSTAVVTLPV-LPPLITKYAAVSTAGHSLTTGDSKVFTSRSHASSTVAQS 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,380,397
Number of Sequences: 59808
Number of extensions: 340431
Number of successful extensions: 1052
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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